Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC114982.1-201ENST00000469402 321 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.99□□□□□ -2.09
CCDC89Q8N998 AC091435.1-201ENST00000505442 584 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC89Q8N998 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC89Q8N998 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
CCDC89Q8N998 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.99□□□□□ -2.09
CCDC89Q8N998 AC010615.1-201ENST00000594254 1764 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CCDC89Q8N998 MIR126-201ENST00000362291 85 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 AL445646.1-201ENST00000431784 216 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 AL139415.2-201ENST00000431968 163 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 AC099677.2-201ENST00000436385 175 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC89Q8N998 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC89Q8N998 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC89Q8N998 RPL36AP21-201ENST00000490372 323 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC89Q8N998 RNU6-948P-201ENST00000516374 107 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 MTND1P35-201ENST00000526739 508 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 AC146944.4-201ENST00000602697 718 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 CTHRC1P1-201ENST00000605383 469 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 AC103591.3-201ENST00000608684 209 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 AC092954.2-201ENST00000609103 430 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 AL133215.3-201ENST00000609801 448 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC89Q8N998 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC89Q8N998 MTND4P5-201ENST00000435821 1374 ntBASIC1.98□□□□□ -2.09
CCDC89Q8N998 SNORD113-7-201ENST00000363762 77 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 RNU1-96P-201ENST00000364163 162 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 RNU6-1019P-201ENST00000364424 107 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 RNU6-338P-201ENST00000383888 105 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 RNU6-780P-201ENST00000391030 104 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 RNU6-908P-201ENST00000410160 94 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 RNU2-20P-201ENST00000410425 191 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 RNU2-7P-201ENST00000410794 178 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 Z98742.3-201ENST00000418637 326 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 AL445685.2-201ENST00000422551 342 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC89Q8N998 AC009237.7-201ENST00000447357 229 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 snoU13.9-201ENST00000458927 103 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 AF186996.7-201ENST00000492781 209 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 TRBVA-201ENST00000498804 316 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 RNU6-1041P-201ENST00000516254 102 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 RRN3P3-201ENST00000549207 578 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 AC013412.1-201ENST00000610687 192 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 AC092881.1-201ENST00000638218 2733 ntBASIC1.97□□□□□ -2.09
CCDC89Q8N998 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC89Q8N998 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 RNU4-42P-201ENST00000364738 142 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 Y_RNA.372-201ENST00000365599 102 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 RNU6-360P-201ENST00000390944 104 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC89Q8N998 DPH3P2-201ENST00000422618 250 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 FTH1P12-201ENST00000432137 551 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 AL353572.1-201ENST00000442490 417 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 NFU1P2-201ENST00000448700 469 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 RPL23AP63-201ENST00000498752 471 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 AC093534.1-201ENST00000504977 132 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC89Q8N998 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC89Q8N998 AC245505.1-201ENST00000556398 224 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC89Q8N998 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC89Q8N998 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC89Q8N998 AC087241.4-201ENST00000612441 480 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC89Q8N998 AC068205.3-201ENST00000636385 468 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 MIR1321-201ENST00000637766 79 ntBASIC1.96□□□□□ -2.1
CCDC89Q8N998 BX322639.1-202ENST00000423987 2213 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 RNU6-790P-201ENST00000384479 105 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CCDC89Q8N998 RN7SKP223-201ENST00000410582 62 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 RNA5SP508-201ENST00000411327 119 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 AC060773.1-201ENST00000421698 310 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 C8orf59P1-201ENST00000429930 303 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 MTND3P21-201ENST00000433774 331 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 AC074290.1-201ENST00000448883 135 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 MTCO3P8-201ENST00000453691 755 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC89Q8N998 AC011406.1-201ENST00000512440 370 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 ZNF519P2-201ENST00000557032 169 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 AL590808.1-201ENST00000618696 141 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 AC064859.1-201ENST00000624741 174 ntBASIC1.95□□□□□ -2.1
CCDC89Q8N998 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC89Q8N998 MIR449A-201ENST00000362113 91 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC89Q8N998 Y_RNA.517-201ENST00000384551 106 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 RNU6-1235P-201ENST00000384559 107 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 AL590002.1-201ENST00000406554 418 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 SNORA3.2-201ENST00000408221 125 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 MIR1267-201ENST00000408723 78 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 RNU2-2P-201ENST00000410396 191 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 Y_RNA.615-201ENST00000410769 117 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 HSPE1P9-201ENST00000440046 311 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 AC069257.2-201ENST00000441819 155 ntBASIC1.94□□□□□ -2.1
CCDC89Q8N998 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC89Q8N998 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms