Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC060773.1-201ENST00000421698 310 ntBASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 RNU7-167P-201ENST00000459160 62 ntBASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 SNORD42A-201ENST00000459584 64 ntBASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 RNU6-232P-201ENST00000517144 64 ntBASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 AC090115.3-201ENST00000553218 849 ntBASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 SNORA59B-202ENST00000578183 701 ntBASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 NIFKP6-201ENST00000598115 845 ntBASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 AC027449.1-201ENST00000608890 407 ntBASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
TRAM1L1Q8N609 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 MIR515-2-201ENST00000384883 83 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 MIR515-1-201ENST00000384884 83 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 MIR513A1-201ENST00000385138 129 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 MIR1283-1-201ENST00000408494 87 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 COX6CP10-201ENST00000416832 224 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 MTCO2P34-201ENST00000421994 607 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 CYCSP46-201ENST00000423569 204 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 AC133104.1-201ENST00000429100 218 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 AL133373.1-201ENST00000497098 94 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 AC010486.2-201ENST00000505572 483 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 RN7SKP265-201ENST00000516448 223 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 RNA5SP384-201ENST00000516615 116 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 MIR4709-201ENST00000577272 72 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 Z84480.1-201ENST00000605131 311 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 AC126177.8-201ENST00000618339 1015 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 AC009033.1-201ENST00000624279 431 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 MIR338-201ENST00000636369 67 ntBASIC1.02□□□□□ -2.25
TRAM1L1Q8N609 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 SNORA18.2-201ENST00000383865 132 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 RNU6-331P-201ENST00000384724 107 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 USP9YP14-201ENST00000430663 563 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 MTCO2P3-201ENST00000442543 421 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 RPS23P4-201ENST00000487908 423 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 DEFB131C-201ENST00000528817 165 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 AP002963.1-201ENST00000530590 184 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 AC026470.2-201ENST00000561492 181 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 AL365434.2-201ENST00000607979 234 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 MIR8065-201ENST00000620577 100 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 AF246928.1-201ENST00000623768 87 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 AC009161.2-201ENST00000624626 138 ntBASIC1.01□□□□□ -2.25
TRAM1L1Q8N609 RNU6-545P-201ENST00000362681 104 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 RNU4-38P-201ENST00000364472 129 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 RNU6-1235P-201ENST00000384559 107 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 RNU6-248P-201ENST00000410720 107 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1□□□□□ -2.25
TRAM1L1Q8N609 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1□□□□□ -2.25
TRAM1L1Q8N609 RPS26P42-201ENST00000413485 326 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 AC010099.3-201ENST00000423896 409 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1□□□□□ -2.25
TRAM1L1Q8N609 AC073910.1-201ENST00000445047 438 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1□□□□□ -2.25
TRAM1L1Q8N609 RNU6-498P-201ENST00000459468 107 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 AL163195.1-201ENST00000496941 348 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1□□□□□ -2.25
TRAM1L1Q8N609 RNU7-40P-201ENST00000516397 64 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 SNORA18.6-201ENST00000516792 115 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 AL137161.1-201ENST00000532231 390 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 MIR4753-201ENST00000585119 83 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 MZT1P2-201ENST00000604387 248 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 AC040896.1-201ENST00000613819 479 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 AC122133.1-201ENST00000613964 233 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1□□□□□ -2.25
TRAM1L1Q8N609 AL133216.2-202ENST00000634512 349 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 AC099654.5-201ENST00000636479 350 ntBASIC1□□□□□ -2.25
TRAM1L1Q8N609 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
TRAM1L1Q8N609 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 RNU6-1123P-201ENST00000362347 106 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 RNU6-282P-201ENST00000365357 103 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 RNU6-418P-201ENST00000384035 107 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 RNU6-456P-201ENST00000384493 107 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 RNU6-297P-201ENST00000384636 107 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 RNU6-1093P-201ENST00000391194 107 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 AC090960.1-201ENST00000421072 306 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 PIGFP2-201ENST00000421400 651 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 DYNLT3P2-201ENST00000442517 295 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 C1DP4-201ENST00000455429 424 ntBASIC0.99□□□□□ -2.25
TRAM1L1Q8N609 RNU7-125P-201ENST00000458760 62 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms