Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 MFSD8-216ENST00000641147 4009 ntBASIC4.11□□□□□ -1.75
CCDC116Q8IYX3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 RNU1-15P-201ENST00000353977 144 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 MIR331-201ENST00000362302 94 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 MIR891A-201ENST00000401237 79 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 AL021397.1-201ENST00000451806 248 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 AC023449.1-201ENST00000454464 154 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 AC010618.1-201ENST00000469924 477 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 IGLV3-26-201ENST00000520756 302 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 PRELID2P1-201ENST00000552837 301 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 RPL23AP91-201ENST00000569211 455 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 AC022655.2-201ENST00000577280 318 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 AL929325.1-201ENST00000603096 117 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC116Q8IYX3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 RNA5SP175-201ENST00000364275 119 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 SNORD32B-201ENST00000364460 84 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 RNU6-756P-201ENST00000383997 107 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 MIR181A2-201ENST00000384863 110 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 MIR624-201ENST00000385217 97 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 SNORA26-201ENST00000391286 122 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 HSPE1P26-201ENST00000405341 275 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 MIR1283-1-201ENST00000408494 87 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 RNA5SP511-201ENST00000410487 115 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 RNA5SP127-201ENST00000411051 133 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 AC011998.1-201ENST00000433403 117 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 MTATP6P21-201ENST00000440681 189 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 RPS29P33-201ENST00000456717 146 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 AL592156.1-201ENST00000508758 304 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 RNU1-104P-201ENST00000517280 175 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 AC015720.1-201ENST00000565251 277 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 AP001318.4-201ENST00000616637 121 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 uc_338.13-201ENST00000618243 179 ntBASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC116Q8IYX3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC116Q8IYX3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC116Q8IYX3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CCDC116Q8IYX3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 Y_RNA.85-201ENST00000363014 111 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 RNA5SP125-201ENST00000364843 120 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 RNU6-1131P-201ENST00000364955 107 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 Y_RNA.328-201ENST00000365208 113 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 Y_RNA.528-201ENST00000384575 108 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 SNORD66.1-201ENST00000391230 76 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 SNORA11F-201ENST00000408237 128 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 NDUFB1P1-201ENST00000435191 180 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 HMGN2P32-201ENST00000444648 269 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 PHBP16-201ENST00000446318 950 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 snoU13.1-201ENST00000459157 104 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 AC010531.2-201ENST00000465012 153 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 AC091153.1-201ENST00000466297 402 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 RN7SL385P-201ENST00000468873 276 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 AL136360.1-201ENST00000503377 1900 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 AC007012.1-201ENST00000567192 175 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 MIR4715-201ENST00000584117 79 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC116Q8IYX3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 Y_RNA.163-201ENST00000363702 113 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 Y_RNA.203-201ENST00000364106 102 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 Y_RNA.558-201ENST00000384685 113 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 SNORD12C-201ENST00000386307 89 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 MIR300-201ENST00000401138 83 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 AC004552.1-201ENST00000419089 348 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 AL159169.1-201ENST00000421119 127 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 ABCF2P2-201ENST00000450549 296 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 RNU6-221P-201ENST00000459541 99 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 AC008155.2-201ENST00000464337 397 ntBASIC4.07□□□□□ -1.76
CCDC116Q8IYX3 RPS26P3-201ENST00000470205 348 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms