Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC65Q8IXS2 SNORD31B-201ENST00000364977 69 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 RNU2-66P-201ENST00000410650 161 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 AC099677.2-201ENST00000436385 175 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 AC010531.2-201ENST00000465012 153 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 MTCYBP18-201ENST00000501056 747 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 AC104984.5-201ENST00000586878 94 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 CTHRC1P1-201ENST00000605383 469 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 AC064807.4-201ENST00000607201 407 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 AC245008.1-201ENST00000608123 476 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.47□□□□□ -2.17
CCDC65Q8IXS2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 RNU6-227P-201ENST00000362865 103 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 RNU6-1329P-201ENST00000365664 107 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 RNY3P9-201ENST00000384727 106 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 MIR514A2-201ENST00000385131 88 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 MIR514A3-201ENST00000385132 88 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 MIR208B-201ENST00000401172 77 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 RNU6-648P-201ENST00000410190 107 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 snoU13.6-201ENST00000458785 104 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 RN7SKP210-201ENST00000459176 261 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 RNU7-14P-201ENST00000459331 62 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 RNU6-1037P-201ENST00000459571 107 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AC097473.1-201ENST00000508142 408 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AC025465.4-201ENST00000513422 638 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 RNU6-405P-201ENST00000516637 110 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AP003033.1-201ENST00000527244 415 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 MIR4524B-201ENST00000581569 115 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 MIR3611-201ENST00000584484 83 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AC092747.3-201ENST00000603769 301 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 AL121757.2-201ENST00000611223 313 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 Z99129.1-201ENST00000612510 255 ntBASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC65Q8IXS2 RNU5B-2P-201ENST00000363036 113 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 RNA5SP99-201ENST00000364020 114 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 CALM2P3-201ENST00000400429 449 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 AC108667.1-201ENST00000428618 249 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 AC092436.3-201ENST00000511788 257 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 RNA5SP401-201ENST00000515920 127 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 RNU6-567P-201ENST00000516746 107 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 AC087854.1-201ENST00000519706 414 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 AC025423.5-201ENST00000550230 219 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 SCOCP1-201ENST00000554676 349 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 AC090517.1-201ENST00000569307 266 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 MIR4421-201ENST00000578133 69 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 AC009541.1-201ENST00000438279 2662 ntBASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC65Q8IXS2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 RNU6-1322P-201ENST00000364309 107 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 RNU6-522P-201ENST00000364497 107 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 RNU6-1317P-201ENST00000364582 104 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 RNU4-66P-201ENST00000365199 138 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 SNORA29-201ENST00000384183 140 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 MTND3P16-201ENST00000452205 344 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 RNU6-1208P-201ENST00000459588 107 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AC005908.1-201ENST00000468701 347 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 Y_RNA.654-201ENST00000497848 106 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 RNU5F-4P-201ENST00000516581 114 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 SNORD60.2-201ENST00000516883 86 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AC104576.1-201ENST00000524225 88 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AC016256.1-201ENST00000547971 354 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AL157687.1-201ENST00000554853 619 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 MIR5094-201ENST00000578766 85 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AC092807.2-201ENST00000609367 243 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 FAM157A-202ENST00000615155 405 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AL136221.1-201ENST00000621449 509 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 AC097520.1-201ENST00000624435 385 ntBASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC65Q8IXS2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms