Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 RPL17P51-201ENST00000605218 238 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AL357078.3-201ENST00000607528 618 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC022079.1-201ENST00000621546 602 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 AC007395.1-201ENST00000451333 677 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 AC083798.1-201ENST00000472671 131 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 AC091435.1-201ENST00000505442 584 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 AC025465.3-201ENST00000510570 311 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 MTND1P15-201ENST00000579262 949 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 MIR3683-201ENST00000580847 82 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 MIR3611-201ENST00000584484 83 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 MIR5692C1-201ENST00000585309 91 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.37□□□□□ -2.19
NUDCD3Q8IVD9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-545P-201ENST00000362681 104 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-862P-201ENST00000362804 105 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-1317P-201ENST00000364582 104 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-60P-201ENST00000364792 103 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-1329P-201ENST00000365664 107 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 SNORA69-201ENST00000383895 132 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 SNORA29-201ENST00000384183 140 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-1119P-201ENST00000384349 108 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 RPL30P13-201ENST00000418873 348 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 TIMM9P3-201ENST00000428659 274 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 ATP5J2P3-201ENST00000451550 258 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 SNORD13-201ENST00000459299 104 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 Y_RNA.688-201ENST00000516565 95 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 AC016256.1-201ENST00000547971 354 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 AC008269.2-201ENST00000561915 1105 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 AC015720.1-201ENST00000565251 277 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 AP001485.1-201ENST00000604799 199 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 CTHRC1P1-201ENST00000605383 469 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 PRR13P7-201ENST00000605538 430 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 AC068792.1-201ENST00000621354 417 ntBASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.36□□□□□ -2.19
NUDCD3Q8IVD9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 Y_RNA.132-201ENST00000363421 102 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 RNU4-13P-201ENST00000364019 141 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-877P-201ENST00000383868 107 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-418P-201ENST00000384035 107 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 RNY3P9-201ENST00000384727 106 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 AL591806.2-201ENST00000433122 173 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 RPS29P23-201ENST00000458635 123 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 snoU13.30-201ENST00000458951 104 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-261P-201ENST00000459506 102 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 Y_RNA.654-201ENST00000497848 106 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 SNORA19.2-201ENST00000516013 114 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 SCOCP1-201ENST00000554676 349 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 HMGB1P33-201ENST00000563485 527 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 SUB1P3-201ENST00000564581 315 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 AC092807.2-201ENST00000609367 243 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 FER-210ENST00000628534 558 ntTSL 5 BASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
NUDCD3Q8IVD9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-562P-201ENST00000362731 107 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 Y_RNA.67-201ENST00000362870 100 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 RNU5B-2P-201ENST00000363036 113 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 Y_RNA.123-201ENST00000363338 102 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-1322P-201ENST00000364309 107 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-203P-201ENST00000384038 104 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 AC245047.4-201ENST00000433189 144 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 UBE2V1P8-201ENST00000437166 265 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 HSPE1P24-201ENST00000450782 238 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 U8.21-201ENST00000459536 136 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 SRRM1P2-201ENST00000464531 1192 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-1041P-201ENST00000516254 102 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 SNORD60.2-201ENST00000516883 86 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 RNA5SP437-201ENST00000517249 129 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 MRPS36P4-201ENST00000534436 298 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 AL157687.1-201ENST00000554853 619 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 AC010620.1-201ENST00000601088 1102 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 AC016727.2-201ENST00000603988 621 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 AC069114.2-201ENST00000604699 304 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 MIR6863-201ENST00000636112 90 ntBASIC1.34□□□□□ -2.19
NUDCD3Q8IVD9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
NUDCD3Q8IVD9 MTND5P26-201ENST00000426018 1752 ntBASIC1.34□□□□□ -2.2
NUDCD3Q8IVD9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-414P-201ENST00000363705 104 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms