Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.11□□□□□ -2.07
PRPF39Q86UA1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.11□□□□□ -2.07
PRPF39Q86UA1 AC015712.3-201ENST00000559380 164 ntBASIC2.11□□□□□ -2.07
PRPF39Q86UA1 AL773524.1-201ENST00000614065 229 ntBASIC2.11□□□□□ -2.07
PRPF39Q86UA1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
PRPF39Q86UA1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PRPF39Q86UA1 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PRPF39Q86UA1 RNU5B-2P-201ENST00000363036 113 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 Y_RNA.132-201ENST00000363421 102 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AL356432.1-201ENST00000405809 419 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 MIR548F1-201ENST00000408667 84 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 RNA5SP501-201ENST00000410990 112 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AL139156.1-201ENST00000412785 841 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AC244636.1-201ENST00000421152 228 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AC139712.2-201ENST00000424302 339 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AL445646.1-201ENST00000431784 216 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AL035666.1-201ENST00000446195 348 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 RNU7-66P-201ENST00000459469 62 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AC130509.1-201ENST00000464158 433 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 TOMM22P6-201ENST00000465035 409 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AC108210.2-201ENST00000503681 201 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 ACA59.1-201ENST00000515966 143 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.1□□□□□ -2.07
PRPF39Q86UA1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.1□□□□□ -2.07
PRPF39Q86UA1 MIR4769-201ENST00000584126 77 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 AC002984.1-201ENST00000591692 448 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 MIR3688-2-201ENST00000636963 87 ntBASIC2.1□□□□□ -2.07
PRPF39Q86UA1 Y_RNA.157-201ENST00000363638 102 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 SNORD31B-201ENST00000364977 69 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 RNU6-1013P-201ENST00000384180 107 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 RNU6-784P-201ENST00000384330 106 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 MIR517A-201ENST00000385001 87 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 RNA5SP212-201ENST00000391223 107 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PRPF39Q86UA1 MTND4LP16-201ENST00000440828 295 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.09□□□□□ -2.07
PRPF39Q86UA1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.09□□□□□ -2.07
PRPF39Q86UA1 RNU2-44P-201ENST00000516795 194 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 RNU6-1314P-201ENST00000517139 104 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 AC026470.2-201ENST00000561492 181 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.09□□□□□ -2.07
PRPF39Q86UA1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.09□□□□□ -2.07
PRPF39Q86UA1 MIR3672-201ENST00000584290 82 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.09□□□□□ -2.07
PRPF39Q86UA1 AP003465.2-201ENST00000602571 373 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 AP000907.4-201ENST00000604143 237 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 AC019193.3-201ENST00000609144 554 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 AC005562.2-201ENST00000618264 111 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 AC137590.2-201ENST00000619709 240 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 AC073869.6-201ENST00000640656 341 ntBASIC2.09□□□□□ -2.07
PRPF39Q86UA1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PRPF39Q86UA1 AC027514.1-201ENST00000588561 1603 ntBASIC2.09□□□□□ -2.08
PRPF39Q86UA1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.09□□□□□ -2.08
PRPF39Q86UA1 RNU1-76P-201ENST00000362903 159 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 Y_RNA.212-201ENST00000364177 102 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 SNORD114-6-201ENST00000364393 72 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PRPF39Q86UA1 MIR320B2-201ENST00000408479 138 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 AL513185.2-201ENST00000425543 193 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 AC087477.1-201ENST00000465747 340 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 AC116337.1-201ENST00000509680 687 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 MRPS17P9-201ENST00000511924 393 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 RNA5SP364-201ENST00000516938 78 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.08□□□□□ -2.08
PRPF39Q86UA1 MIR5006-201ENST00000583027 110 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.15-201ENST00000611544 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.16-201ENST00000613119 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.12-201ENST00000613778 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.20-201ENST00000613956 192 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.9-201ENST00000615427 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 AC005296.1-201ENST00000616145 209 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.11-201ENST00000616345 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.2-201ENST00000616535 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.3-201ENST00000617785 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.19-201ENST00000618602 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 RNU2-1-201ENST00000618664 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.6-201ENST00000619225 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.5-201ENST00000619465 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 U2.10-201ENST00000620268 191 ntBASIC2.08□□□□□ -2.08
PRPF39Q86UA1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.08□□□□□ -2.08
PRPF39Q86UA1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PRPF39Q86UA1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.07□□□□□ -2.08
PRPF39Q86UA1 SNORA8-201ENST00000384574 139 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 AC019129.1-201ENST00000403786 261 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.07□□□□□ -2.08
PRPF39Q86UA1 UBE2V1P8-201ENST00000437166 265 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 DAP3P1-201ENST00000441522 278 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 MTND1P11-201ENST00000456661 876 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 AF186996.7-201ENST00000492781 209 ntBASIC2.07□□□□□ -2.08
PRPF39Q86UA1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms