Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC107222.1-201ENST00000510899 637 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.14□□□□□ -2.07
LDB1Q86U70 RNU6-991P-201ENST00000516168 107 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 RNU7-193P-201ENST00000516723 65 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 Y_RNA.708-201ENST00000516950 96 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 RNA5SP490-201ENST00000517141 136 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.14□□□□□ -2.07
LDB1Q86U70 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 UBE2V2P2-201ENST00000587677 504 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 AC243960.4-201ENST00000600532 288 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
LDB1Q86U70 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 ZNF299P-201ENST00000406845 1804 ntBASIC2.14□□□□□ -2.07
LDB1Q86U70 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
LDB1Q86U70 AL596028.1-201ENST00000326971 197 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 SNORD115-32-201ENST00000364079 82 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 Y_RNA.490-201ENST00000384413 102 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 Y_RNA.533-201ENST00000384596 114 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 MIR29C-201ENST00000385231 88 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 AL023284.1-201ENST00000403956 276 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 AL356432.1-201ENST00000405809 419 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 Y_RNA.594-201ENST00000410373 140 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 RN7SKP284-201ENST00000411002 343 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 AL135786.1-201ENST00000415892 214 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 AL035666.1-201ENST00000446195 348 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 HMGN2P18-201ENST00000450680 270 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 snoU13.30-201ENST00000458951 104 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 RPS23P5-201ENST00000495419 428 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 RNA5SP200-201ENST00000516360 103 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 RNU5F-4P-201ENST00000516581 114 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 SNORA31.25-201ENST00000517242 134 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.13□□□□□ -2.07
LDB1Q86U70 AL121579.1-201ENST00000555129 305 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 AC091544.4-201ENST00000555268 342 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.13□□□□□ -2.07
LDB1Q86U70 AC026470.2-201ENST00000561492 181 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 AC010928.2-201ENST00000588017 287 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.13□□□□□ -2.07
LDB1Q86U70 RMST_6.1-201ENST00000611980 203 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 MIR203B-201ENST00000636080 86 ntBASIC2.13□□□□□ -2.07
LDB1Q86U70 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.13□□□□□ -2.07
LDB1Q86U70 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
LDB1Q86U70 Y_RNA.2-201ENST00000362330 96 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 SNORD14D-201ENST00000384390 87 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 MIR32-201ENST00000384965 70 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 HMGN2P39-201ENST00000398005 273 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 SNORD23.1-201ENST00000408212 104 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 MIR1262-201ENST00000408276 93 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 AC027124.2-201ENST00000428249 105 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 AL356320.1-201ENST00000429616 163 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 Z82188.1-201ENST00000436709 154 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.12□□□□□ -2.07
LDB1Q86U70 Y_RNA.635-201ENST00000459041 101 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 RNU7-14P-201ENST00000459331 62 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 Y_RNA.670-201ENST00000516255 105 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 SCARNA16.3-201ENST00000516595 184 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 RNU6-1098P-201ENST00000516772 96 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 RNU6-1198P-201ENST00000516904 67 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.12□□□□□ -2.07
LDB1Q86U70 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.12□□□□□ -2.07
LDB1Q86U70 MIR548S-201ENST00000581352 82 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 AL158827.2-201ENST00000602494 330 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 AC016727.2-201ENST00000603988 621 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 AC013412.1-201ENST00000610687 192 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.12□□□□□ -2.07
LDB1Q86U70 AL359314.1-201ENST00000616913 261 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 PISRT1.1-201ENST00000616930 107 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 AC005562.2-201ENST00000618264 111 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 AC012640.5-201ENST00000623897 319 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 AL691447.3-201ENST00000635020 330 ntBASIC2.12□□□□□ -2.07
LDB1Q86U70 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.12□□□□□ -2.07
LDB1Q86U70 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
LDB1Q86U70 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LDB1Q86U70 RNU1-76P-201ENST00000362903 159 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 Y_RNA.99-201ENST00000363138 105 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 RNU6-595P-201ENST00000363944 107 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 Y_RNA.303-201ENST00000364998 94 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 SNORA18.2-201ENST00000383865 132 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 U8.10-201ENST00000384260 133 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 Y_RNA.473-201ENST00000384333 102 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 SNORA67.3-201ENST00000384366 140 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 SNORA3.2-201ENST00000408221 125 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 MIR320B2-201ENST00000408479 138 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 SNORA11.4-201ENST00000408823 129 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 Z98742.3-201ENST00000418637 326 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.11□□□□□ -2.07
LDB1Q86U70 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.11□□□□□ -2.07
LDB1Q86U70 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.11□□□□□ -2.07
LDB1Q86U70 MTND4P18-201ENST00000447010 465 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 RN7SKP210-201ENST00000459176 261 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 TRBV12-1-201ENST00000479785 344 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.11□□□□□ -2.07
LDB1Q86U70 AC008549.1-201ENST00000512900 643 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 RNU7-175P-201ENST00000515915 61 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 RNU2-44P-201ENST00000516795 194 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 RNA5SP54-201ENST00000516951 92 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.11□□□□□ -2.07
LDB1Q86U70 SNRPGP20-201ENST00000604477 205 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms