Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.3□□□□□ -1.88
DDX53Q86TM3 AC140059.1-201ENST00000489238 361 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 AC025465.3-201ENST00000510570 311 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 RNU6-570P-201ENST00000517051 105 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 EIF4A1P12-201ENST00000551910 141 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 AC110588.1-201ENST00000559699 137 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX53Q86TM3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 AC006023.1-201ENST00000603944 259 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 AL670379.2-201ENST00000604983 252 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 AC010999.1-201ENST00000611856 324 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 MIR376A1-201ENST00000616574 68 ntBASIC3.3□□□□□ -1.88
DDX53Q86TM3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
DDX53Q86TM3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX53Q86TM3 AC009487.2-201ENST00000420969 6821 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 AC069528.2-201ENST00000624849 1991 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX53Q86TM3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX53Q86TM3 MIR22-201ENST00000362190 85 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 U3.9-201ENST00000363823 204 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 RNU6-805P-201ENST00000365643 106 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 Y_RNA.483-201ENST00000384380 101 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 MRPL35P1-201ENST00000404272 572 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 AC073901.1-201ENST00000462471 408 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.29□□□□□ -1.88
DDX53Q86TM3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.29□□□□□ -1.88
DDX53Q86TM3 MIR4300-201ENST00000581016 96 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 AL356575.1-201ENST00000603008 283 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 AC026241.1-201ENST00000517873 2142 ntBASIC3.29□□□□□ -1.88
DDX53Q86TM3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
DDX53Q86TM3 MIR30E-201ENST00000362104 92 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 Y_RNA.288-201ENST00000364854 92 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 RNU6-937P-201ENST00000384325 106 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 SNORA48.8-201ENST00000391324 134 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 Y_RNA.618-201ENST00000410949 107 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX53Q86TM3 AC022018.1-201ENST00000430685 241 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 AL139132.1-201ENST00000431587 344 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX53Q86TM3 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 MTND4LP22-201ENST00000508209 276 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX53Q86TM3 MIR4672-201ENST00000583126 81 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 RPL12P50-201ENST00000603116 116 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 AL133393.1-201ENST00000603277 287 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 SNRPGP20-201ENST00000604477 205 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 AL357075.2-201ENST00000614906 189 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 AC090517.3-201ENST00000625170 141 ntBASIC3.28□□□□□ -1.88
DDX53Q86TM3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.28□□□□□ -1.88
DDX53Q86TM3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX53Q86TM3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.28□□□□□ -1.88
DDX53Q86TM3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
DDX53Q86TM3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.27□□□□□ -1.89
DDX53Q86TM3 LINC02555-201ENST00000563933 1951 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 RNU5F-3P-201ENST00000363767 117 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 Y_RNA.179-201ENST00000363844 90 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 RNU6-245P-201ENST00000384020 107 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 RNU6-301P-201ENST00000384277 107 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 MIR215-201ENST00000384858 110 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 SNORD67-201ENST00000390833 111 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 SNORD115-46-201ENST00000390982 71 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 SNORA12-201ENST00000391162 147 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 MIR320B2-201ENST00000408479 138 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.27□□□□□ -1.89
DDX53Q86TM3 AC027124.2-201ENST00000428249 105 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.27□□□□□ -1.89
DDX53Q86TM3 SEM1P1-201ENST00000506694 209 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 SNORA40.9-201ENST00000515895 93 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 HSPE1P18-201ENST00000517602 280 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 AC027176.1-201ENST00000560204 514 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 MZT1P2-201ENST00000604387 248 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 AC062037.2-201ENST00000610137 73 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.27□□□□□ -1.89
DDX53Q86TM3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
DDX53Q86TM3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DDX53Q86TM3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
DDX53Q86TM3 MTND5P35-201ENST00000557537 1720 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DDX53Q86TM3 AP003122.5-201ENST00000527668 3766 ntBASIC3.27□□□□□ -1.89
DDX53Q86TM3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.27□□□□□ -1.89
DDX53Q86TM3 AC099654.7-201ENST00000635788 2127 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
DDX53Q86TM3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.26□□□□□ -1.89
DDX53Q86TM3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
DDX53Q86TM3 Y_RNA.188-201ENST00000363952 111 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 RNU6-793P-201ENST00000384233 104 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 MIR218-1-201ENST00000384999 110 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 AL031121.1-201ENST00000406553 254 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 Y_RNA.595-201ENST00000410403 105 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 ARL5AP4-201ENST00000430731 512 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.26□□□□□ -1.89
DDX53Q86TM3 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 RPS27P29-201ENST00000463110 252 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 AC091179.3-201ENST00000474761 144 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 RPS29P26-201ENST00000477483 171 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 RPL26P26-201ENST00000480251 434 ntBASIC3.26□□□□□ -1.89
DDX53Q86TM3 Y_RNA.683-201ENST00000516508 93 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms