Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-655P-201ENST00000362858 107 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 RNU6-1317P-201ENST00000364582 104 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 RNU6-214P-201ENST00000384130 107 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 RPL21P1-201ENST00000399532 476 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 RNU2-40P-201ENST00000410833 196 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 BX510359.4-201ENST00000423750 193 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 RNU6-256P-201ENST00000516747 97 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC026371.1-201ENST00000551867 419 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 IMMP1LP2-201ENST00000552954 492 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC015720.1-201ENST00000565251 277 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC018638.8-201ENST00000588755 281 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 ZNF209P-201ENST00000593450 2304 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 Y_RNA.100-201ENST00000363141 102 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 Y_RNA.112-201ENST00000363250 102 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 SNORD32A-201ENST00000364805 84 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 SNORA6-201ENST00000384033 151 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 RNU6-1222P-201ENST00000384615 107 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 MIR517C-201ENST00000385103 95 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AL355497.1-201ENST00000406262 551 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 RN7SKP101-201ENST00000411376 320 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 HMGN2P19-201ENST00000425149 265 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 RPS15AP10-201ENST00000432472 382 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AL353752.1-201ENST00000454946 260 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 RNU6-1037P-201ENST00000459571 107 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 RPL9P9-202ENST00000466501 579 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC018868.1-201ENST00000491307 315 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC060780.3-201ENST00000589464 80 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC007229.1-201ENST00000590455 412 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AL031274.2-201ENST00000599419 203 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 VN1R107P-201ENST00000601784 209 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AL138726.1-201ENST00000614873 333 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AL157834.3-201ENST00000615543 103 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 AC098657.3-201ENST00000620434 263 ntBASIC2.17□□□□□ -2.06
NPHP3Q7Z494 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.17□□□□□ -2.06
NPHP3Q7Z494 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NPHP3Q7Z494 snoU2_19.1-201ENST00000362361 80 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 RNU6-1285P-201ENST00000363480 105 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 RNU4-13P-201ENST00000364019 141 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AL356776.1-201ENST00000406574 447 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 MIR1323-201ENST00000408090 73 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 RNU6-325P-201ENST00000411132 105 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AC009161.1-201ENST00000417306 376 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 MTND3P9-201ENST00000429526 346 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.16□□□□□ -2.06
NPHP3Q7Z494 RNU7-187P-201ENST00000458985 68 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AC055731.1-201ENST00000474387 401 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AC107032.1-201ENST00000485945 480 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 TRBVA-201ENST00000498804 316 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AC018710.1-201ENST00000506509 158 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 RNU5F-2P-201ENST00000516066 82 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 RNU4-49P-201ENST00000516080 140 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 Y_RNA.670-201ENST00000516255 105 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 RNU6-1088P-201ENST00000516850 104 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AC100830.2-201ENST00000581636 240 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AC091135.1-201ENST00000585943 307 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 AP001836.1-201ENST00000604675 523 ntBASIC2.16□□□□□ -2.06
NPHP3Q7Z494 CASC19-280ENST00000642102 1351 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 RNU6-1210P-201ENST00000363775 107 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 Y_RNA.212-201ENST00000364177 102 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 RNU6-1106P-201ENST00000390845 107 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 UBE2V1P4-201ENST00000425374 344 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 USP9YP28-201ENST00000435142 589 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 MTND1P11-201ENST00000456661 876 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.15□□□□□ -2.07
NPHP3Q7Z494 snoU13.14-201ENST00000459372 104 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.15□□□□□ -2.07
NPHP3Q7Z494 RPL30P1-201ENST00000488676 339 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.15□□□□□ -2.07
NPHP3Q7Z494 ATP5EP1-201ENST00000510257 156 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 RNU6-612P-201ENST00000516909 102 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 SNORA31.24-201ENST00000517232 57 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 AC034114.1-201ENST00000520293 285 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.15□□□□□ -2.07
NPHP3Q7Z494 AC233702.2-202ENST00000562547 291 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 MIR4529-201ENST00000578110 78 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 AC093913.1-201ENST00000614178 329 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 AC009248.2-201ENST00000619826 254 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 AC009033.1-201ENST00000624279 431 ntBASIC2.15□□□□□ -2.07
NPHP3Q7Z494 Y_RNA.151-201ENST00000363566 112 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms