Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHFQ7M4L6 AC091812.1-201ENST00000432235 1948 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHFQ7M4L6 RNU6-137P-201ENST00000363680 108 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 U3.9-201ENST00000363823 204 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 RNU6-944P-201ENST00000364023 107 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 MIR10B-201ENST00000385011 110 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 RNU1-139P-201ENST00000391307 165 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 FO393413.1-201ENST00000402892 195 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 RN7SKP27-201ENST00000410684 333 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.35□□□□□ -2.03
SHFQ7M4L6 WARS2P1-201ENST00000429678 537 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 USP9YP16-201ENST00000430287 407 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.35□□□□□ -2.03
SHFQ7M4L6 USP9YP23-201ENST00000455085 407 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 AC112492.4-201ENST00000456549 352 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 snoU13.22-201ENST00000459428 104 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.35□□□□□ -2.03
SHFQ7M4L6 RNU6-1137P-201ENST00000517073 99 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 GNAI2P1-201ENST00000541815 315 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 AC006600.1-201ENST00000572529 153 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 MIR5092-201ENST00000583139 88 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 MIR5195-201ENST00000583555 115 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 MIR3616-201ENST00000584070 92 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 MIR6798-201ENST00000612887 67 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 U2.1-201ENST00000618978 145 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.35□□□□□ -2.03
SHFQ7M4L6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHFQ7M4L6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SHFQ7M4L6 AC005592.1-201ENST00000566527 1640 ntBASIC2.35□□□□□ -2.03
SHFQ7M4L6 SNORD32B-201ENST00000364460 84 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 RNA5SP171-201ENST00000391071 115 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 RNU6-159P-201ENST00000391080 106 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 AL356057.3-201ENST00000402607 340 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 Y_RNA.597-201ENST00000410463 100 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 AC114482.1-201ENST00000418010 247 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 AL590556.1-201ENST00000423231 483 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 EIF1P2-201ENST00000428233 350 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.34□□□□□ -2.03
SHFQ7M4L6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.34□□□□□ -2.03
SHFQ7M4L6 AL445687.1-201ENST00000439946 251 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.34□□□□□ -2.03
SHFQ7M4L6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.34□□□□□ -2.03
SHFQ7M4L6 AL118496.2-201ENST00000448300 230 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 AC107032.1-201ENST00000485945 480 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 AC132942.1-201ENST00000486753 483 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.34□□□□□ -2.03
SHFQ7M4L6 RNU6-1114P-201ENST00000516022 107 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 RNU6-475P-201ENST00000516073 104 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 RNU6-586P-201ENST00000517265 104 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 AC023442.1-201ENST00000531247 422 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 AC079600.2-201ENST00000550076 130 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 MIR1254-2-201ENST00000579553 63 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 MIR4680-201ENST00000580906 66 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 VN1R91P-201ENST00000594377 169 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 AL138963.2-201ENST00000605137 226 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 AL132822.1-201ENST00000617063 513 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.34□□□□□ -2.03
SHFQ7M4L6 ZNF204P-201ENST00000416749 2397 ntBASIC2.34□□□□□ -2.04
SHFQ7M4L6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SHFQ7M4L6 Y_RNA.158-201ENST00000363651 101 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 RNU6-639P-201ENST00000384074 107 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 MIR606-201ENST00000384851 96 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 MIR95-201ENST00000385072 81 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 MIR9-1-201ENST00000385198 89 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SHFQ7M4L6 SUMO1P4-201ENST00000429430 302 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 AC092427.1-202ENST00000430569 476 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.33□□□□□ -2.04
SHFQ7M4L6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.33□□□□□ -2.04
SHFQ7M4L6 EEF1B2P7-201ENST00000451177 676 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.33□□□□□ -2.04
SHFQ7M4L6 RNU6-911P-201ENST00000516523 104 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 SNORA40.14-201ENST00000516543 86 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 RNU6-1198P-201ENST00000516904 67 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 RNA5SP54-201ENST00000516951 92 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 DEFB131C-201ENST00000528817 165 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.33□□□□□ -2.04
SHFQ7M4L6 HSBP1P1-201ENST00000555205 166 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.33□□□□□ -2.04
SHFQ7M4L6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.33□□□□□ -2.04
SHFQ7M4L6 AC104695.3-201ENST00000604052 296 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 AC096577.2-201ENST00000611455 153 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 AL137847.3-201ENST00000611521 109 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.33□□□□□ -2.04
SHFQ7M4L6 MIR5739-201ENST00000619803 80 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.33□□□□□ -2.04
SHFQ7M4L6 AC243829.7-201ENST00000633081 225 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 BX322639.1-202ENST00000423987 2213 ntBASIC2.33□□□□□ -2.04
SHFQ7M4L6 AC073346.2-201ENST00000624724 2058 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SHFQ7M4L6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SHFQ7M4L6 RNU6-873P-201ENST00000363833 107 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 SNORA63C-201ENST00000364578 129 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SHFQ7M4L6 AC117470.1-201ENST00000381974 330 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 RNU6-708P-201ENST00000384217 107 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms