Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 AL358453.1-201ENST00000422522 250 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 AC068781.1-201ENST00000488231 618 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 AC090255.1-201ENST00000495779 349 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 MIR449C-201ENST00000516047 92 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 SCARNA16.2-201ENST00000516520 172 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 RNU6-586P-201ENST00000517265 104 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 PCGEM1.1-201ENST00000613431 131 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 AC022202.1-201ENST00000613515 211 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 AC245884.12-201ENST00000615364 59 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 MIR5739-201ENST00000619803 80 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 AL008636.1-201ENST00000625038 1018 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 AL669831.3-213ENST00000636676 183 ntBASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.02□□□□□ -2.09
CHMP1BQ7LBR1 RNU6-874P-201ENST00000362390 105 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 SNORD32B-201ENST00000364460 84 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 Y_RNA.419-201ENST00000384041 102 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 RNU6-968P-201ENST00000384076 107 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 MTCYBP2-201ENST00000407745 171 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 AC022028.1-201ENST00000412054 408 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 AC012306.1-201ENST00000423267 114 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 MTCO3P29-201ENST00000432119 779 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 AC093019.1-201ENST00000443135 252 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 AL513124.1-201ENST00000450410 614 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 AC114801.2-201ENST00000503825 781 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 ACA59.1-201ENST00000515966 143 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 RNU6-965P-201ENST00000516721 96 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 Y_RNA.718-201ENST00000517110 102 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 AC021231.3-201ENST00000558497 370 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 MIR3136-201ENST00000583498 78 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 MIR4298-201ENST00000584380 73 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.01□□□□□ -2.09
CHMP1BQ7LBR1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CHMP1BQ7LBR1 AC233981.2-201ENST00000611524 1614 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 U8.10-201ENST00000384260 133 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 EIF4EP2-201ENST00000422816 654 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2□□□□□ -2.09
CHMP1BQ7LBR1 IPO7P1-201ENST00000442031 636 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 Y_RNA.635-201ENST00000459041 101 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 AC087477.1-201ENST00000465747 340 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 AC104435.1-201ENST00000483483 166 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 RPL30P10-201ENST00000488148 337 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2□□□□□ -2.09
CHMP1BQ7LBR1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 Y_RNA.708-201ENST00000516950 96 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 DEFB131C-201ENST00000528817 165 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 MIR4648-201ENST00000580107 72 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2□□□□□ -2.09
CHMP1BQ7LBR1 AC116312.1-201ENST00000606841 314 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 MIR1248-201ENST00000629190 106 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2□□□□□ -2.09
CHMP1BQ7LBR1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
CHMP1BQ7LBR1 AC006026.1-201ENST00000444025 1803 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 MTND5P9-201ENST00000503854 1755 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 MTND4P1-201ENST00000457501 1466 ntBASIC2□□□□□ -2.09
CHMP1BQ7LBR1 Y_RNA.2-201ENST00000362330 96 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 RNU6-595P-201ENST00000363944 107 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 RNU6-593P-201ENST00000364716 112 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 RNU6-890P-201ENST00000384121 107 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 RNY4P36-201ENST00000391116 96 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 EIF1AXP1-201ENST00000419267 435 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 AL353997.1-201ENST00000432936 108 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 AC096638.1-201ENST00000444678 216 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 SNORD19B-201ENST00000459623 84 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 RNA5SP200-201ENST00000516360 103 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 SNORA48.11-201ENST00000517015 89 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 AC233702.2-202ENST00000562547 291 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 CYP4A27P-201ENST00000567218 190 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 AC009127.3-201ENST00000570531 403 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 MIR3923-201ENST00000579521 83 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 MIR3945-201ENST00000581853 98 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 AL355297.2-201ENST00000604792 129 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 AC005520.5-201ENST00000613926 164 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 AL132822.1-201ENST00000617063 513 ntBASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CHMP1BQ7LBR1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms