Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC015911.1-201ENST00000495111 156 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 RPS29P11-201ENST00000496507 171 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 Y_RNA.682-201ENST00000516457 100 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 RNU7-30P-201ENST00000516835 62 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 SNORA48.11-201ENST00000517015 89 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AC021231.3-201ENST00000558497 370 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 MIR4790-201ENST00000577799 79 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 MIR4529-201ENST00000578110 78 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 MIR4524B-201ENST00000581569 115 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AL355297.2-201ENST00000604792 129 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AL034555.1-201ENST00000604816 211 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AC025754.2-201ENST00000606491 432 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AC019193.3-201ENST00000609144 554 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 U4atac.1-201ENST00000618345 95 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AC090517.3-201ENST00000625170 141 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 AL133216.2-202ENST00000634512 349 ntBASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RFWD3Q6PCD5 snoU2_19.1-201ENST00000362361 80 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 RNU4-56P-201ENST00000364700 142 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 MIR517A-201ENST00000385001 87 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 SNORA26.9-201ENST00000391322 122 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AC007677.1-201ENST00000445757 515 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 MTND3P10-201ENST00000450967 341 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AC107032.1-201ENST00000485945 480 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 MTND5P5-201ENST00000503764 376 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 SNORA31.16-201ENST00000516773 139 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AC016256.1-201ENST00000547971 354 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AC015712.3-201ENST00000559380 164 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AC124303.1-201ENST00000605703 360 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 MIR3976-201ENST00000606807 139 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 SNORA43.4-201ENST00000629559 138 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 AL450472.1-202ENST00000637286 180 ntBASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RFWD3Q6PCD5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 RNU6-1274P-201ENST00000384557 107 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 AL590556.1-201ENST00000423231 483 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 AC098614.3-201ENST00000438957 440 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 AL353572.1-201ENST00000442490 417 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 HMGN1P12-201ENST00000499125 195 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 AC108210.2-201ENST00000503681 201 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 RNU6-567P-201ENST00000516746 107 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 DEFB122-202ENST00000569013 197 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 AC005668.1-201ENST00000571142 476 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 POLR3GP2-201ENST00000588366 668 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 MIR8081-201ENST00000611533 95 ntBASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
RFWD3Q6PCD5 RNU4-15P-201ENST00000362613 141 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 Y_RNA.88-201ENST00000363029 99 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 Y_RNA.123-201ENST00000363338 102 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 RNU6-784P-201ENST00000384330 106 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 MIR548K-201ENST00000408406 116 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 AC074085.1-201ENST00000413598 418 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 HMGN2P23-201ENST00000456759 269 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 ACA59.1-201ENST00000515966 143 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 RNU1-54P-201ENST00000517181 120 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 MIR3923-201ENST00000579521 83 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 FGF7P1-201ENST00000582820 288 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 AL078605.1-201ENST00000603529 500 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 uc_338.5-201ENST00000611839 155 ntBASIC1.88□□□□□ -2.11
RFWD3Q6PCD5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 SNORA72.1-201ENST00000363485 129 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 Y_RNA.339-201ENST00000365325 102 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 RNU6-1286P-201ENST00000383871 107 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 RNU6-306P-201ENST00000384617 107 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 MIR561-201ENST00000385216 97 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 AL591034.2-201ENST00000402839 359 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 MTCYBP2-201ENST00000407745 171 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 PDCL2P1-201ENST00000419302 352 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 Z82205.1-201ENST00000428456 297 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 HMGB1P18-201ENST00000438801 619 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 MRPS17P9-201ENST00000511924 393 ntBASIC1.87□□□□□ -2.11
RFWD3Q6PCD5 RNU6-548P-201ENST00000517083 115 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms