Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 RNU6-38P-201ENST00000384085 107 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 SNORD116-3-201ENST00000384287 95 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 SNORD116-7-201ENST00000384404 95 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 SNORD116-5-201ENST00000384462 95 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 RNU6-1026P-201ENST00000384465 108 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 MTCO1P44-201ENST00000441935 243 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 AC007395.1-201ENST00000451333 677 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 AC025465.4-201ENST00000513422 638 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 RNU6-323P-201ENST00000521915 107 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 MIR3611-201ENST00000584484 83 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.36□□□□□ -2.19
TRIM40Q6P9F5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 MIR378A-201ENST00000362177 66 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 RNU4-20P-201ENST00000365601 151 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 Y_RNA.378-201ENST00000365652 113 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 RNU6-1329P-201ENST00000365664 107 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 RNU6-338P-201ENST00000383888 105 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 RNU6-1093P-201ENST00000391194 107 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 snoU13.6-201ENST00000458785 104 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 U8.21-201ENST00000459536 136 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 AC010531.2-201ENST00000465012 153 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 AC087477.1-201ENST00000465747 340 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 RPL9P9-202ENST00000466501 579 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 Y_RNA.654-201ENST00000497848 106 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 FAM206BP-201ENST00000510179 541 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 RNU6-970P-201ENST00000516312 107 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 RNU1-92P-201ENST00000517017 135 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 AC104576.1-201ENST00000524225 88 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 AC025423.5-201ENST00000550230 219 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 MIR5692C1-201ENST00000585309 91 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 AL357078.3-201ENST00000607528 618 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 AL512598.1-201ENST00000610158 273 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 MIR8074-201ENST00000615081 81 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 AC022079.1-201ENST00000621546 602 ntBASIC1.35□□□□□ -2.19
TRIM40Q6P9F5 SNORA18.2-201ENST00000383865 132 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 SNORA69-201ENST00000383895 132 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 RNU6-1042P-201ENST00000384204 107 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 RNU6-296P-201ENST00000384608 107 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 BTF3P4-201ENST00000418852 495 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 MTND3P9-201ENST00000429526 346 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 USP9YP28-201ENST00000435142 589 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 HMGB1P18-201ENST00000438801 619 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 RN7SKP210-201ENST00000459176 261 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 FO393415.2-201ENST00000480085 343 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 AC091885.1-201ENST00000506658 268 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 AC096745.1-201ENST00000509945 370 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 AC025465.3-201ENST00000510570 311 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 SNORA19.2-201ENST00000516013 114 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 SNORD60.2-201ENST00000516883 86 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 SCOCP1-201ENST00000554676 349 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 BNIP3P10-201ENST00000605360 577 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 AC092807.2-201ENST00000609367 243 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 AL121757.2-201ENST00000611223 313 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 AC083806.3-201ENST00000614016 455 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.34□□□□□ -2.19
TRIM40Q6P9F5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
TRIM40Q6P9F5 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
TRIM40Q6P9F5 AL159152.1-201ENST00000635019 2587 ntBASIC1.34□□□□□ -2.2
TRIM40Q6P9F5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 MTND5P10-201ENST00000603719 1809 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 AC245060.5-201ENST00000610778 3293 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 RNU1-62P-201ENST00000362599 164 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 Y_RNA.132-201ENST00000363421 102 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 RNU6-1317P-201ENST00000364582 104 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 Y_RNA.409-201ENST00000383990 98 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 SNORA29-201ENST00000384183 140 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 Y_RNA.481-201ENST00000384373 102 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 MTCO1P21-201ENST00000416634 589 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 RPL21P111-201ENST00000418453 477 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 TIMM9P3-201ENST00000428659 274 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 AL359672.1-201ENST00000442302 409 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 AL357134.1-201ENST00000445848 426 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 ATP5J2P3-201ENST00000451550 258 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 RNU6-1208P-201ENST00000459588 107 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 RNU6-405P-201ENST00000516637 110 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 DEFB131C-201ENST00000528817 165 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 AL161670.1-201ENST00000554348 137 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 MTND1P15-201ENST00000579262 949 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 AC010620.1-201ENST00000601088 1102 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 AC068792.1-201ENST00000621354 417 ntBASIC1.33□□□□□ -2.2
TRIM40Q6P9F5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms