Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AP005136.1-201ENST00000579765 429 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 MIR4285-201ENST00000581001 85 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 AC016925.2-201ENST00000605108 242 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 AC104458.1-201ENST00000608243 463 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 AC005562.2-201ENST00000618264 111 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 AL359880.1-201ENST00000621879 266 ntBASIC1.54□□□□□ -2.16
NIPAL3Q6P499 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 RNU6-545P-201ENST00000362681 104 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 RNU6-877P-201ENST00000383868 107 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 RNU6-1286P-201ENST00000383871 107 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 MIR514A2-201ENST00000385131 88 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 MIR514A3-201ENST00000385132 88 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
NIPAL3Q6P499 MIR300-201ENST00000401138 83 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.53□□□□□ -2.16
NIPAL3Q6P499 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.53□□□□□ -2.16
NIPAL3Q6P499 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.53□□□□□ -2.16
NIPAL3Q6P499 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.53□□□□□ -2.16
NIPAL3Q6P499 HMGN1P13-201ENST00000505795 138 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 AC092436.3-201ENST00000511788 257 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 Y_RNA.693-201ENST00000516641 110 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 RNU6-1332P-201ENST00000516666 104 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.53□□□□□ -2.16
NIPAL3Q6P499 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.53□□□□□ -2.16
NIPAL3Q6P499 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.53□□□□□ -2.16
NIPAL3Q6P499 AL512360.1-201ENST00000555346 234 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 AC026470.2-201ENST00000561492 181 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 PIGPP4-201ENST00000584447 307 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 AC069114.2-201ENST00000604699 304 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.53□□□□□ -2.16
NIPAL3Q6P499 RNU5B-2P-201ENST00000363036 113 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 RNU6-414P-201ENST00000363705 104 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 Y_RNA.231-201ENST00000364358 102 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
NIPAL3Q6P499 MIR521-1-201ENST00000384902 87 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 CALM2P3-201ENST00000400429 449 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 RNU6-325P-201ENST00000411132 105 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 MTCO1P21-201ENST00000416634 589 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 EBAG9P1-201ENST00000418955 543 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.52□□□□□ -2.17
NIPAL3Q6P499 AL357134.1-201ENST00000445848 426 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.52□□□□□ -2.17
NIPAL3Q6P499 MTCO1P29-201ENST00000496868 288 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 AC091435.1-201ENST00000505442 584 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.52□□□□□ -2.17
NIPAL3Q6P499 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NIPAL3Q6P499 MIR5006-201ENST00000583027 110 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 MIR4753-201ENST00000585119 83 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.52□□□□□ -2.17
NIPAL3Q6P499 AL359697.1-201ENST00000624879 587 ntBASIC1.52□□□□□ -2.17
NIPAL3Q6P499 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 RNU4-42P-201ENST00000364738 142 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 SNORA26.9-201ENST00000391322 122 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 RPS26P42-201ENST00000413485 326 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 SEPT14P3-201ENST00000439401 183 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 AL732372.2-207ENST00000445840 183 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 SEPT14P2-201ENST00000453405 183 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 SEPT14P4-201ENST00000513445 186 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 SNORA25.15-201ENST00000516487 89 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 RNU6-250P-201ENST00000516958 103 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 FO082796.1-201ENST00000523795 183 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 DEFB131C-201ENST00000528817 165 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 AC100830.2-201ENST00000581636 240 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 FGF7P1-201ENST00000582820 288 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 AC016727.2-201ENST00000603988 621 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 MIR8076-201ENST00000611401 83 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 OR4G1P-203ENST00000641984 1631 ntBASIC1.51□□□□□ -2.17
NIPAL3Q6P499 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.51□□□□□ -2.17
NIPAL3Q6P499 AC121333.1-201ENST00000567488 2709 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RNU6-862P-201ENST00000362804 105 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RNU6-338P-201ENST00000383888 105 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RNU6-418P-201ENST00000384035 107 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RNU6-296P-201ENST00000384608 107 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 MIR520A-201ENST00000384862 85 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AL627390.1-201ENST00000396055 340 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 MIR450B-201ENST00000401182 78 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 MIR1283-1-201ENST00000408494 87 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RNU2-16P-201ENST00000410712 136 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 RNU2-7P-201ENST00000410794 178 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.5□□□□□ -2.17
NIPAL3Q6P499 ERLEC1P1-201ENST00000433806 578 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AC099677.2-201ENST00000436385 175 ntBASIC1.5□□□□□ -2.17
NIPAL3Q6P499 AC004386.2-201ENST00000441858 148 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms