Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
USPL1Q5W0Q7 Z98941.1-201ENST00000407764 100 ntBASIC4.09□□□□□ -1.75
USPL1Q5W0Q7 RPL19P1-201ENST00000411635 428 ntBASIC4.09□□□□□ -1.75
USPL1Q5W0Q7 AC023141.4-201ENST00000412031 328 ntBASIC4.09□□□□□ -1.75
USPL1Q5W0Q7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.09□□□□□ -1.75
USPL1Q5W0Q7 snoU13.14-201ENST00000459372 104 ntBASIC4.09□□□□□ -1.75
USPL1Q5W0Q7 Y_RNA.703-201ENST00000516846 111 ntBASIC4.09□□□□□ -1.75
USPL1Q5W0Q7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.09□□□□□ -1.75
USPL1Q5W0Q7 AC012531.5-201ENST00000611375 151 ntBASIC4.09□□□□□ -1.75
USPL1Q5W0Q7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
USPL1Q5W0Q7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
USPL1Q5W0Q7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
USPL1Q5W0Q7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 RNU6-1289P-201ENST00000384431 106 ntBASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 RNU6-1248P-201ENST00000391096 64 ntBASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 AL512633.1-201ENST00000399931 655 ntBASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 MIR208B-201ENST00000401172 77 ntBASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 MIR1183-201ENST00000408856 89 ntBASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 COX6CP10-201ENST00000416832 224 ntBASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 RNU5F-2P-201ENST00000516066 82 ntBASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 RPS15AP11-201ENST00000594193 385 ntBASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USPL1Q5W0Q7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 RNA5SP295-201ENST00000362655 121 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 RNU6-799P-201ENST00000363567 107 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 AP002088.1-201ENST00000382740 395 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 Y_RNA.435-201ENST00000384095 112 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 SNORA18.3-201ENST00000384122 132 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 SNORA7.4-201ENST00000384249 137 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 AC126124.2-201ENST00000413542 321 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 MRPS10P1-201ENST00000448483 130 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 HMGN2P7-201ENST00000456186 273 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 AC087441.2-201ENST00000529141 262 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 MZT1P2-201ENST00000604387 248 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 U7.8-201ENST00000619968 63 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 U6.106-201ENST00000636360 105 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.07□□□□□ -1.76
USPL1Q5W0Q7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 AL035425.3-201ENST00000564206 4996 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 RNU6-198P-201ENST00000384258 104 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 SNORA54-201ENST00000384281 123 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 RAB28P5-201ENST00000427490 651 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 IFNA11P-201ENST00000446352 526 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 AC027176.1-201ENST00000560204 514 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 MIR4644-201ENST00000579929 84 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 AL034555.1-201ENST00000604816 211 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 AC068831.7-201ENST00000616954 363 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 AL136164.4-201ENST00000625013 2135 ntBASIC4.06□□□□□ -1.76
USPL1Q5W0Q7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 SNORD114-19-201ENST00000363072 75 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 Y_RNA.217-201ENST00000364214 105 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 RNA5SP126-201ENST00000365092 109 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 RNU6-301P-201ENST00000384277 107 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 MIR184-201ENST00000384962 84 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 CBX3P9-201ENST00000402326 552 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AC010099.1-201ENST00000455434 375 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 Y_RNA.641-201ENST00000459414 105 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AC010401.1-201ENST00000463867 348 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 CENPBD1P1-201ENST00000464061 469 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AC091179.3-201ENST00000474761 144 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AL121594.1-201ENST00000475906 575 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 Y_RNA.662-201ENST00000516028 97 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 RNU6-861P-201ENST00000516745 106 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 RNU6-255P-201ENST00000516957 105 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms