Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 SCARNA16.2-201ENST00000516520 172 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 RNA5SP384-201ENST00000516615 116 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 RNA5SP82-201ENST00000516707 92 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 CYP4A27P-201ENST00000567218 190 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 AL117336.2-201ENST00000602435 335 ntBASIC2.41□□□□□ -2.02
USP41Q3LFD5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.41□□□□□ -2.02
USP41Q3LFD5 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.02
USP41Q3LFD5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.4□□□□□ -2.03
USP41Q3LFD5 SNORD114-1-201ENST00000362705 72 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 RNU6-310P-201ENST00000384655 107 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 MIR221-201ENST00000385135 110 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 MTCYBP4-201ENST00000401524 249 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 Y_RNA.597-201ENST00000410463 100 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 Y_RNA.646-201ENST00000410980 101 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.4□□□□□ -2.03
USP41Q3LFD5 Y_RNA.653-201ENST00000459091 95 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 AC087477.1-201ENST00000465747 340 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.4□□□□□ -2.03
USP41Q3LFD5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.4□□□□□ -2.03
USP41Q3LFD5 HSPE1P18-201ENST00000517602 280 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.4□□□□□ -2.03
USP41Q3LFD5 AC098657.3-201ENST00000620434 263 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 MIR6766-201ENST00000622641 72 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.4□□□□□ -2.03
USP41Q3LFD5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.4□□□□□ -2.03
USP41Q3LFD5 ZNF299P-201ENST00000406845 1804 ntBASIC2.4□□□□□ -2.03
USP41Q3LFD5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.39□□□□□ -2.03
USP41Q3LFD5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
USP41Q3LFD5 RNU6-944P-201ENST00000364023 107 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 SNORA46.1-201ENST00000391069 153 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 RNU6-1093P-201ENST00000391194 107 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 AL358453.1-201ENST00000422522 250 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.39□□□□□ -2.03
USP41Q3LFD5 AL353997.1-201ENST00000432936 108 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.39□□□□□ -2.03
USP41Q3LFD5 AC079804.2-201ENST00000490376 200 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.39□□□□□ -2.03
USP41Q3LFD5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.39□□□□□ -2.03
USP41Q3LFD5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.39□□□□□ -2.03
USP41Q3LFD5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.39□□□□□ -2.03
USP41Q3LFD5 MIR5696-201ENST00000578474 85 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 MIR4524B-201ENST00000581569 115 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 MIR4658-201ENST00000584344 65 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 7SK.7-201ENST00000603504 247 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 AC084781.2-201ENST00000615568 161 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 AC104985.2-201ENST00000620598 500 ntBASIC2.39□□□□□ -2.03
USP41Q3LFD5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.39□□□□□ -2.03
USP41Q3LFD5 AP006437.1-201ENST00000641440 3685 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USP41Q3LFD5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USP41Q3LFD5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.38□□□□□ -2.03
USP41Q3LFD5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USP41Q3LFD5 SNORA38-201ENST00000363946 132 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 RNU6-378P-201ENST00000384324 107 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
USP41Q3LFD5 RNY4P36-201ENST00000391116 96 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 SNORA12-201ENST00000391162 147 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 AL079342.1-201ENST00000401460 267 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 MTCYBP2-201ENST00000407745 171 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 MTCO2P27-201ENST00000420740 428 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 Z82188.1-201ENST00000436709 154 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 MTCO3P10-201ENST00000455912 772 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.38□□□□□ -2.03
USP41Q3LFD5 RNU6-237P-201ENST00000515985 71 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 RNU6-307P-201ENST00000516743 106 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 Y_RNA.718-201ENST00000517110 102 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.38□□□□□ -2.03
USP41Q3LFD5 MYL12BP1-201ENST00000569826 507 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 AC005899.2-201ENST00000584353 90 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 AL359697.1-201ENST00000624879 587 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.38□□□□□ -2.03
USP41Q3LFD5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
USP41Q3LFD5 RNU4-79P-201ENST00000362764 141 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 RNU6-1159P-201ENST00000362933 107 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 RNU1-23P-201ENST00000363361 144 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 RNU4-9P-201ENST00000364951 139 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 SNORD116-29-201ENST00000384516 83 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 MIR32-201ENST00000384965 70 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 SNORA11.4-201ENST00000408823 129 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 AC243428.1-201ENST00000421099 264 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 HMGN2P3-201ENST00000433603 273 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 AC236972.2-201ENST00000434979 310 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 HMGN2P5-201ENST00000436882 273 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.37□□□□□ -2.03
USP41Q3LFD5 SNORD19B-201ENST00000459623 84 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 AC097473.1-201ENST00000508142 408 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 RNU6-965P-201ENST00000516721 96 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 SNORA48.11-201ENST00000517015 89 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 IGLV3-17-201ENST00000519099 244 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.37□□□□□ -2.03
USP41Q3LFD5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.37□□□□□ -2.03
USP41Q3LFD5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.37□□□□□ -2.03
USP41Q3LFD5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.37□□□□□ -2.03
USP41Q3LFD5 AC010928.2-201ENST00000588017 287 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 C8orf59P2-201ENST00000603441 271 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 AC005014.2-201ENST00000607795 599 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 MIR6132-201ENST00000622083 109 ntBASIC2.37□□□□□ -2.03
USP41Q3LFD5 SCARNA4-201ENST00000629045 128 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms