Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 Y_RNA.670-201ENST00000516255 105 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 Y_RNA.675-201ENST00000516389 149 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 RNU6-612P-201ENST00000516909 102 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 RNU1-54P-201ENST00000517181 120 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 NDUFA5P6-201ENST00000542110 379 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.53□□□□□ -2
CCDC96Q2M329 MIR4448-201ENST00000584360 86 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 AL096840.1-201ENST00000603287 93 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 AP000654.2-201ENST00000605633 586 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.53□□□□□ -2
CCDC96Q2M329 MIR8076-201ENST00000611401 83 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 AC005296.1-201ENST00000616145 209 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 AC241585.2-209ENST00000638217 143 ntBASIC2.53□□□□□ -2
CCDC96Q2M329 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.53□□□□□ -2
CCDC96Q2M329 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.53□□□□□ -2
CCDC96Q2M329 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 MIRLET7G-201ENST00000362280 84 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 SNORD32A-201ENST00000364805 84 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 RNU6-692P-201ENST00000384496 107 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 SNORA48.3-201ENST00000391081 134 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 RNY4P36-201ENST00000391116 96 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 HMGN2P39-201ENST00000398005 273 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 CBX3P9-201ENST00000402326 552 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 AL591034.2-201ENST00000402839 359 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 Y_RNA.594-201ENST00000410373 140 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 RPL23AP95-201ENST00000426806 265 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC96Q2M329 UBE2V1P7-201ENST00000446395 340 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 AL137159.1-201ENST00000452808 512 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 PCMTD1P1-201ENST00000455560 355 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC96Q2M329 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC96Q2M329 SCARNA16.3-201ENST00000516595 184 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 HSPE1P18-201ENST00000517602 280 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC96Q2M329 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC96Q2M329 AC002984.1-201ENST00000591692 448 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 AL133255.1-201ENST00000606374 441 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 AC019193.3-201ENST00000609144 554 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 ZNF355P-201ENST00000427301 3216 ntBASIC2.52□□□□□ -2.01
CCDC96Q2M329 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC96Q2M329 MTND4P29-201ENST00000503122 1372 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CCDC96Q2M329 SNORD56.1-201ENST00000362913 68 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 RNU1-23P-201ENST00000363361 144 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 Y_RNA.404-201ENST00000383978 102 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 RNU4-52P-201ENST00000384209 138 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 MIR29B2-201ENST00000385055 81 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 AL023284.1-201ENST00000403956 276 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 RNU6-1050P-201ENST00000410388 107 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 RPS20P15-201ENST00000412792 311 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC96Q2M329 AC245102.2-201ENST00000448956 180 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 ELOCP24-201ENST00000456370 334 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC96Q2M329 snoU13.14-201ENST00000459372 104 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 snoU13.15-201ENST00000459407 104 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 U8.21-201ENST00000459536 136 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 AL121594.1-201ENST00000475906 575 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 Y_RNA.708-201ENST00000516950 96 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC96Q2M329 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC96Q2M329 AL109918.3-201ENST00000603072 338 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 AL356157.2-201ENST00000605122 111 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 AL159153.1-201ENST00000619688 317 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 AC097372.5-201ENST00000623665 376 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 MTND4LP32-201ENST00000636111 270 ntBASIC2.51□□□□□ -2.01
CCDC96Q2M329 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CCDC96Q2M329 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC96Q2M329 RNU6-227P-201ENST00000362865 103 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 RNU6-527P-201ENST00000363425 104 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 RNU6-1059P-201ENST00000363752 98 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 SNORA75.4-201ENST00000391278 119 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 AL079342.1-201ENST00000401460 267 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 AL591043.1-201ENST00000432461 424 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 AC018868.1-201ENST00000491307 315 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC96Q2M329 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC96Q2M329 AC018889.1-201ENST00000605372 397 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 MIR3976-201ENST00000606807 139 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 AC009229.3-201ENST00000608056 282 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 AL669831.3-213ENST00000636676 183 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 ZNF720P1-201ENST00000562403 1939 ntBASIC2.5□□□□□ -2.01
CCDC96Q2M329 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CCDC96Q2M329 AC073544.1-201ENST00000600110 1595 ntBASIC2.49□□□□□ -2.01
CCDC96Q2M329 SNORD50.1-201ENST00000362987 71 ntBASIC2.49□□□□□ -2.01
CCDC96Q2M329 RNU6-694P-201ENST00000364071 147 ntBASIC2.49□□□□□ -2.01
CCDC96Q2M329 RNU6-546P-201ENST00000383991 107 ntBASIC2.49□□□□□ -2.01
CCDC96Q2M329 RNU6-784P-201ENST00000384330 106 ntBASIC2.49□□□□□ -2.01
CCDC96Q2M329 RNU6-310P-201ENST00000384655 107 ntBASIC2.49□□□□□ -2.01
CCDC96Q2M329 HMGB3P2-201ENST00000411913 584 ntBASIC2.49□□□□□ -2.01
CCDC96Q2M329 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC96Q2M329 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC96Q2M329 AC079354.2-201ENST00000453523 154 ntBASIC2.49□□□□□ -2.01
CCDC96Q2M329 snoU13.26-201ENST00000459452 105 ntBASIC2.49□□□□□ -2.01
CCDC96Q2M329 HMGB1P35-201ENST00000503360 598 ntBASIC2.49□□□□□ -2.01
CCDC96Q2M329 AC114801.2-201ENST00000503825 781 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms