Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.54□□□□□ -2.16
SF3A2Q15428 MIR4713-201ENST00000582691 75 ntBASIC1.54□□□□□ -2.16
SF3A2Q15428 AL162413.1-201ENST00000603198 110 ntBASIC1.54□□□□□ -2.16
SF3A2Q15428 AP000907.4-201ENST00000604143 237 ntBASIC1.54□□□□□ -2.16
SF3A2Q15428 AC008945.2-201ENST00000606056 604 ntBASIC1.54□□□□□ -2.16
SF3A2Q15428 AC002044.1-201ENST00000606707 158 ntBASIC1.54□□□□□ -2.16
SF3A2Q15428 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.54□□□□□ -2.16
SF3A2Q15428 AL353770.2-201ENST00000620024 78 ntBASIC1.54□□□□□ -2.16
SF3A2Q15428 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.54□□□□□ -2.16
SF3A2Q15428 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.54□□□□□ -2.16
SF3A2Q15428 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SF3A2Q15428 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SF3A2Q15428 RNU6-552P-201ENST00000362869 119 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 Y_RNA.89-201ENST00000363031 102 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 RNU4-13P-201ENST00000364019 141 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 RNU6-534P-201ENST00000364877 106 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 MIR544A-201ENST00000384855 91 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 SNORA16.2-201ENST00000390991 127 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 RNU6-903P-201ENST00000391270 109 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 MIR1277-201ENST00000408536 78 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 RNU2-29P-201ENST00000410423 189 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.53□□□□□ -2.16
SF3A2Q15428 UBE2V1P4-201ENST00000425374 344 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.53□□□□□ -2.16
SF3A2Q15428 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.53□□□□□ -2.16
SF3A2Q15428 SEPT14P3-201ENST00000439401 183 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.53□□□□□ -2.16
SF3A2Q15428 AL732372.2-207ENST00000445840 183 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 SEPT14P2-201ENST00000453405 183 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 SCARNA18-201ENST00000459004 134 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 MTCO3P38-201ENST00000468910 766 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.53□□□□□ -2.16
SF3A2Q15428 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.53□□□□□ -2.16
SF3A2Q15428 SEPT14P4-201ENST00000513445 186 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.53□□□□□ -2.16
SF3A2Q15428 FO082796.1-201ENST00000523795 183 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.53□□□□□ -2.16
SF3A2Q15428 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
SF3A2Q15428 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.53□□□□□ -2.16
SF3A2Q15428 SNORA59B-202ENST00000578183 701 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 MIR4801-201ENST00000582704 82 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 AL022345.1-201ENST00000607292 135 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 AC103810.8-201ENST00000607347 118 ntBASIC1.53□□□□□ -2.16
SF3A2Q15428 FER-210ENST00000628534 558 ntTSL 5 BASIC1.53□□□□□ -2.16
SF3A2Q15428 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.53□□□□□ -2.16
SF3A2Q15428 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.53□□□□□ -2.16
SF3A2Q15428 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SF3A2Q15428 Y_RNA.295-201ENST00000364918 102 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 RNU6-393P-201ENST00000384475 107 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 RNU6-1127P-201ENST00000384580 107 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 Y_RNA.573-201ENST00000384763 105 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 RNU6-1068P-201ENST00000410958 103 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 EIF4EP2-201ENST00000422816 654 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 MTND1P2-201ENST00000430604 821 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 AL591043.1-201ENST00000432461 424 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 PRPS1P1-201ENST00000445305 876 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.52□□□□□ -2.17
SF3A2Q15428 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.52□□□□□ -2.17
SF3A2Q15428 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.52□□□□□ -2.17
SF3A2Q15428 AC104136.1-201ENST00000512969 394 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.52□□□□□ -2.17
SF3A2Q15428 RBM11P1-201ENST00000604951 799 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 AC104458.1-201ENST00000608243 463 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SF3A2Q15428 AC002553.4-201ENST00000616896 331 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 uc_338.11-201ENST00000619132 160 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 MIR6515-201ENST00000619843 57 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.52□□□□□ -2.17
SF3A2Q15428 Z69720.2-201ENST00000624755 279 ntBASIC1.52□□□□□ -2.17
SF3A2Q15428 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.51□□□□□ -2.17
SF3A2Q15428 MIR96-201ENST00000362288 78 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 RNU6-451P-201ENST00000362921 107 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 SNORD114-26-201ENST00000363543 72 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 RNY3P3-201ENST00000363816 102 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 RNU4-42P-201ENST00000364738 142 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 RNU6-1283P-201ENST00000365314 105 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 RNU6-877P-201ENST00000383868 107 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 RNU6-692P-201ENST00000384496 107 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 SNORD37.1-201ENST00000390968 65 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 RNU4-46P-201ENST00000410818 138 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.51□□□□□ -2.17
SF3A2Q15428 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.51□□□□□ -2.17
SF3A2Q15428 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.51□□□□□ -2.17
SF3A2Q15428 RBMX2P4-201ENST00000441256 376 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 NFU1P2-201ENST00000448700 469 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.51□□□□□ -2.17
SF3A2Q15428 SNRPFP3-201ENST00000457792 225 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 AC027575.1-201ENST00000481064 460 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 AC069439.1-201ENST00000494739 167 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.51□□□□□ -2.17
SF3A2Q15428 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.51□□□□□ -2.17
SF3A2Q15428 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.51□□□□□ -2.17
SF3A2Q15428 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.51□□□□□ -2.17
SF3A2Q15428 RNU2-69P-201ENST00000516061 100 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 RNU5F-2P-201ENST00000516066 82 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 SNORA31.24-201ENST00000517232 57 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 HIF1AP1-201ENST00000553642 175 ntBASIC1.51□□□□□ -2.17
SF3A2Q15428 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms