Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AL590002.1-201ENST00000406554 418 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 NCOR1P3-201ENST00000420479 303 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.51□□□□□ -2.17
RAB40BQ12829 AC097473.1-201ENST00000508142 408 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.51□□□□□ -2.17
RAB40BQ12829 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.51□□□□□ -2.17
RAB40BQ12829 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.51□□□□□ -2.17
RAB40BQ12829 Y_RNA.665-201ENST00000516177 98 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 RNU6-314P-201ENST00000516574 104 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 SUMO2P18-201ENST00000518873 252 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.51□□□□□ -2.17
RAB40BQ12829 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.51□□□□□ -2.17
RAB40BQ12829 AL158827.2-201ENST00000602494 330 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 AC146944.4-201ENST00000602697 718 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 AC103810.8-201ENST00000607347 118 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 MIR8076-201ENST00000611401 83 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 AC022513.1-201ENST00000624512 117 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.51□□□□□ -2.17
RAB40BQ12829 AL691447.3-201ENST00000635020 330 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 AC099654.12-201ENST00000639868 649 ntBASIC1.51□□□□□ -2.17
RAB40BQ12829 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.51□□□□□ -2.17
RAB40BQ12829 Y_RNA.41-201ENST00000362646 102 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RAB40BQ12829 RNU6-128P-201ENST00000383976 107 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 Y_RNA.436-201ENST00000384097 102 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RAB40BQ12829 Y_RNA.615-201ENST00000410769 117 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 AC016907.1-201ENST00000419483 435 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 SNRPEP10-201ENST00000420249 274 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 NDUFA5P4-201ENST00000436704 385 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 HSPE1P21-201ENST00000438283 308 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 AC003989.2-201ENST00000440224 169 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.5□□□□□ -2.17
RAB40BQ12829 AC007395.1-201ENST00000451333 677 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.5□□□□□ -2.17
RAB40BQ12829 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.5□□□□□ -2.17
RAB40BQ12829 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.5□□□□□ -2.17
RAB40BQ12829 DEFB131C-201ENST00000528817 165 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.5□□□□□ -2.17
RAB40BQ12829 MRPS36P4-201ENST00000534436 298 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 MIR5094-201ENST00000578766 85 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 CPDP1-201ENST00000579660 283 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 FGF7P1-201ENST00000582820 288 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 AC104458.1-201ENST00000608243 463 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 AF250324.2-201ENST00000608299 610 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 RMST_3.1-201ENST00000611651 109 ntBASIC1.5□□□□□ -2.17
RAB40BQ12829 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RAB40BQ12829 RNU6-545P-201ENST00000362681 104 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 RNU6-562P-201ENST00000362731 107 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 RNU6-254P-201ENST00000363377 107 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 Y_RNA.132-201ENST00000363421 102 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RAB40BQ12829 RPS26P42-201ENST00000413485 326 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 MTCO1P20-201ENST00000425366 358 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 MTCO1P44-201ENST00000441935 243 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AC010531.2-201ENST00000465012 153 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.49□□□□□ -2.17
RAB40BQ12829 AC105313.1-201ENST00000509121 353 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.49□□□□□ -2.17
RAB40BQ12829 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.49□□□□□ -2.17
RAB40BQ12829 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.49□□□□□ -2.17
RAB40BQ12829 ZNF519P2-201ENST00000557032 169 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.49□□□□□ -2.17
RAB40BQ12829 AC010928.2-201ENST00000588017 287 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AC016727.2-201ENST00000603988 621 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AC010900.2-201ENST00000604508 210 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 CTHRC1P1-201ENST00000605383 469 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.49□□□□□ -2.17
RAB40BQ12829 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AC083806.3-201ENST00000614016 455 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AC015540.1-201ENST00000615828 501 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AC005562.2-201ENST00000618264 111 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.49□□□□□ -2.17
RAB40BQ12829 AL159152.1-201ENST00000635019 2587 ntBASIC1.49□□□□□ -2.17
RAB40BQ12829 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.48□□□□□ -2.17
RAB40BQ12829 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
RAB40BQ12829 AL356292.1-201ENST00000283110 373 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 Y_RNA.38-201ENST00000362617 102 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 RNU6-451P-201ENST00000362921 107 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 RNU6-1252P-201ENST00000363054 104 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 SNORD113-7-201ENST00000363762 77 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 RNY3P3-201ENST00000363816 102 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
RAB40BQ12829 MIR583-201ENST00000384846 75 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
RAB40BQ12829 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RAB40BQ12829 MTCO3P46-201ENST00000425787 232 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 MTND3P21-201ENST00000433774 331 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 HMGN2P26-201ENST00000463169 339 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.48□□□□□ -2.17
RAB40BQ12829 AC010409.1-201ENST00000487382 476 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 AF186996.7-201ENST00000492781 209 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 AC091435.1-201ENST00000505442 584 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.48□□□□□ -2.17
RAB40BQ12829 AC096745.1-201ENST00000509945 370 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 SNORA31.17-201ENST00000516953 127 ntBASIC1.48□□□□□ -2.17
RAB40BQ12829 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
RAB40BQ12829 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms