Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.48□□□□□ -2.17
SMARCB1Q12824 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
SMARCB1Q12824 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SMARCB1Q12824 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SMARCB1Q12824 Y_RNA.504-201ENST00000384481 104 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 SNORA12.2-201ENST00000391040 156 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 RNU6-908P-201ENST00000410160 94 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 SRIP3-201ENST00000413200 219 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.47□□□□□ -2.17
SMARCB1Q12824 AC078809.1-201ENST00000427601 140 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.47□□□□□ -2.17
SMARCB1Q12824 AC083904.1-201ENST00000487828 231 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 SNORD60.2-201ENST00000516883 86 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 RNU6-323P-201ENST00000521915 107 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.47□□□□□ -2.17
SMARCB1Q12824 AL512360.1-201ENST00000555346 234 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 RNU6-89P-201ENST00000606519 100 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 AL357078.3-201ENST00000607528 618 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 AC104458.1-201ENST00000608243 463 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.47□□□□□ -2.17
SMARCB1Q12824 PCGEM1.1-201ENST00000613431 131 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.47□□□□□ -2.17
SMARCB1Q12824 AC022513.1-201ENST00000624512 117 ntBASIC1.47□□□□□ -2.17
SMARCB1Q12824 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SMARCB1Q12824 RNU6-1329P-201ENST00000365664 107 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 Y_RNA.517-201ENST00000384551 106 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 MRPS10P2-201ENST00000431226 381 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 MTCO2P7-201ENST00000446518 666 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 AC007547.1-201ENST00000462177 490 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 AC079140.5-201ENST00000507882 310 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.46□□□□□ -2.18
SMARCB1Q12824 AC092436.3-201ENST00000511788 257 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 Y_RNA.676-201ENST00000516393 96 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 SNORA44.1-201ENST00000517031 108 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 AP005660.1-201ENST00000522972 293 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.46□□□□□ -2.18
SMARCB1Q12824 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.46□□□□□ -2.18
SMARCB1Q12824 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.46□□□□□ -2.18
SMARCB1Q12824 AC010525.2-201ENST00000590920 195 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 AL353770.2-201ENST00000620024 78 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 AC068137.3-201ENST00000639191 341 ntBASIC1.46□□□□□ -2.18
SMARCB1Q12824 MTND5P10-201ENST00000603719 1809 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SMARCB1Q12824 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
SMARCB1Q12824 AC092268.1-201ENST00000342691 405 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 Y_RNA.4-201ENST00000362333 112 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 Y_RNA.38-201ENST00000362617 102 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 Y_RNA.99-201ENST00000363138 105 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 RNU6-1090P-201ENST00000364065 94 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 Y_RNA.231-201ENST00000364358 102 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 RNU6-1317P-201ENST00000364582 104 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 Y_RNA.318-201ENST00000365131 97 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 MIR29C-201ENST00000385231 88 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 RNA5SP465-201ENST00000391195 109 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 RNA5SP501-201ENST00000410990 112 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 RNU2-41P-201ENST00000410991 178 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.45□□□□□ -2.18
SMARCB1Q12824 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.45□□□□□ -2.18
SMARCB1Q12824 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 snoU13.6-201ENST00000458785 104 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 AC005840.1-201ENST00000498412 377 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 AC008628.2-201ENST00000502605 298 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 AC016632.1-201ENST00000503994 196 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 AC021146.2-201ENST00000504736 556 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 SNORA19.2-201ENST00000516013 114 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 Y_RNA.665-201ENST00000516177 98 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 RNU6-612P-201ENST00000516909 102 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 DEFB131C-201ENST00000528817 165 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 HMGB1P33-201ENST00000563485 527 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.45□□□□□ -2.18
SMARCB1Q12824 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.45□□□□□ -2.18
SMARCB1Q12824 AL356157.2-201ENST00000605122 111 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 CTHRC1P1-201ENST00000605383 469 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 AL590240.4-201ENST00000616908 390 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.45□□□□□ -2.18
SMARCB1Q12824 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.45□□□□□ -2.18
SMARCB1Q12824 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.44□□□□□ -2.18
SMARCB1Q12824 OR4G1P-203ENST00000641984 1631 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 RNU1-58P-201ENST00000362413 163 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 RNU6-451P-201ENST00000362921 107 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 RNU6-392P-201ENST00000364926 101 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 Y_RNA.327-201ENST00000365201 102 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 Y_RNA.332-201ENST00000365271 113 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 Y_RNA.481-201ENST00000384373 102 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 RNU11-3P-201ENST00000391111 133 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 Y_RNA.615-201ENST00000410769 117 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 AL590556.1-201ENST00000423231 483 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.44□□□□□ -2.18
SMARCB1Q12824 MTCO1P20-201ENST00000425366 358 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 MTND3P9-201ENST00000429526 346 ntBASIC1.44□□□□□ -2.18
SMARCB1Q12824 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.44□□□□□ -2.18
SMARCB1Q12824 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.44□□□□□ -2.18
SMARCB1Q12824 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.44□□□□□ -2.18
SMARCB1Q12824 MTND1P1-201ENST00000445453 368 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms