Protein–RNA interactions for Protein: Q00LT1

PRCD, Progressive rod-cone degeneration protein, humanhuman

Predictions only

Length 54 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRCDQ00LT1 SNORA36.1-201ENST00000363424 132 ntBASIC-1.85□□□□□ -2.71
PRCDQ00LT1 RNU6-244P-201ENST00000391028 104 ntBASIC-1.85□□□□□ -2.71
PRCDQ00LT1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.85□□□□□ -2.71
PRCDQ00LT1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.85□□□□□ -2.71
PRCDQ00LT1 SKA2P1-201ENST00000425592 390 ntBASIC-1.85□□□□□ -2.71
PRCDQ00LT1 AC073910.1-201ENST00000445047 438 ntBASIC-1.85□□□□□ -2.71
PRCDQ00LT1 AC079354.2-201ENST00000453523 154 ntBASIC-1.85□□□□□ -2.71
PRCDQ00LT1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-1.85□□□□□ -2.71
PRCDQ00LT1 SUMO2P18-201ENST00000518873 252 ntBASIC-1.85□□□□□ -2.71
PRCDQ00LT1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-1.85□□□□□ -2.71
PRCDQ00LT1 AL391903.3-201ENST00000612158 163 ntBASIC-1.85□□□□□ -2.71
PRCDQ00LT1 AC009269.6-201ENST00000621778 588 ntBASIC-1.85□□□□□ -2.71
PRCDQ00LT1 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 RNA5SP205-201ENST00000364653 136 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 MIR514A1-201ENST00000385133 98 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 AL603865.2-201ENST00000401679 213 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 AL133264.1-201ENST00000407157 562 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 MTCYBP38-201ENST00000417160 1123 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 MTCO3P29-201ENST00000432119 779 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.86□□□□□ -2.71
PRCDQ00LT1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-1.86□□□□□ -2.71
PRCDQ00LT1 AL358072.1-201ENST00000604156 575 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 SEPT14P17-201ENST00000617978 177 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 AC009318.4-201ENST00000620496 486 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 SCARNA4-201ENST00000629045 128 ntBASIC-1.86□□□□□ -2.71
PRCDQ00LT1 RNU6-730P-201ENST00000383954 104 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.87□□□□□ -2.71
PRCDQ00LT1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.87□□□□□ -2.71
PRCDQ00LT1 AC069257.2-201ENST00000441819 155 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-1.87□□□□□ -2.71
PRCDQ00LT1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 AC023632.1-201ENST00000518463 375 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-1.87□□□□□ -2.71
PRCDQ00LT1 AC018630.3-201ENST00000542637 96 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 AL353997.4-201ENST00000586196 166 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 AC125232.2-201ENST00000592457 143 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 AC091304.9-201ENST00000612091 226 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 AL627230.5-201ENST00000619807 58 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 AC112487.2-201ENST00000637950 304 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 MTND4P8-201ENST00000514997 1362 ntBASIC-1.87□□□□□ -2.71
PRCDQ00LT1 MTND4P9-201ENST00000507819 1346 ntBASIC-1.88□□□□□ -2.71
PRCDQ00LT1 RNU6-428P-201ENST00000362942 107 ntBASIC-1.88□□□□□ -2.71
PRCDQ00LT1 MIR601-201ENST00000385256 79 ntBASIC-1.88□□□□□ -2.71
PRCDQ00LT1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.88□□□□□ -2.71
PRCDQ00LT1 FCF1P9-201ENST00000412546 282 ntBASIC-1.88□□□□□ -2.71
PRCDQ00LT1 DNAJA1P2-201ENST00000421360 1197 ntBASIC-1.88□□□□□ -2.71
PRCDQ00LT1 AC008267.5-201ENST00000424928 265 ntBASIC-1.88□□□□□ -2.71
PRCDQ00LT1 AL133396.1-201ENST00000432048 687 ntBASIC-1.88□□□□□ -2.71
PRCDQ00LT1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.88□□□□□ -2.71
PRCDQ00LT1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-1.88□□□□□ -2.71
PRCDQ00LT1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.88□□□□□ -2.71
PRCDQ00LT1 AC021146.6-201ENST00000514659 117 ntBASIC-1.88□□□□□ -2.71
PRCDQ00LT1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.88□□□□□ -2.71
PRCDQ00LT1 U6.48-201ENST00000618523 106 ntBASIC-1.88□□□□□ -2.71
PRCDQ00LT1 AL109755.1-201ENST00000401791 649 ntBASIC-1.89□□□□□ -2.71
PRCDQ00LT1 RNU6-57P-201ENST00000411348 103 ntBASIC-1.89□□□□□ -2.71
PRCDQ00LT1 RPL21P38-201ENST00000418090 167 ntBASIC-1.89□□□□□ -2.71
PRCDQ00LT1 AL392003.1-201ENST00000434394 243 ntBASIC-1.89□□□□□ -2.71
PRCDQ00LT1 RPL17P19-201ENST00000489069 552 ntBASIC-1.89□□□□□ -2.71
PRCDQ00LT1 RNU1-86P-201ENST00000516108 154 ntBASIC-1.89□□□□□ -2.71
PRCDQ00LT1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.89□□□□□ -2.71
PRCDQ00LT1 RNU1-107P-201ENST00000516617 154 ntBASIC-1.89□□□□□ -2.71
PRCDQ00LT1 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.89□□□□□ -2.71
PRCDQ00LT1 MIR101-2-201ENST00000362195 79 ntBASIC-1.9□□□□□ -2.71
PRCDQ00LT1 RNU6-944P-201ENST00000364023 107 ntBASIC-1.9□□□□□ -2.71
PRCDQ00LT1 U8.5-201ENST00000364528 136 ntBASIC-1.9□□□□□ -2.71
PRCDQ00LT1 RNU6-40P-201ENST00000384254 107 ntBASIC-1.9□□□□□ -2.71
PRCDQ00LT1 RNU6-705P-201ENST00000410601 104 ntBASIC-1.9□□□□□ -2.71
PRCDQ00LT1 AC068533.2-201ENST00000411872 306 ntBASIC-1.9□□□□□ -2.71
PRCDQ00LT1 ARL5AP1-201ENST00000418991 388 ntBASIC-1.9□□□□□ -2.71
PRCDQ00LT1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-1.9□□□□□ -2.71
PRCDQ00LT1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.9□□□□□ -2.71
PRCDQ00LT1 Y_RNA.25-201ENST00000362528 102 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 SNORD32A-201ENST00000364805 84 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 RPS20P2-201ENST00000402520 389 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 SNORD111-201ENST00000408139 94 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 AC060773.1-201ENST00000421698 310 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-1.91□□□□□ -2.72
PRCDQ00LT1 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 RNA5SP216-201ENST00000516111 123 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 RNA5SP291-201ENST00000517222 105 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-1.91□□□□□ -2.72
PRCDQ00LT1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-1.91□□□□□ -2.72
PRCDQ00LT1 AC100830.2-201ENST00000581636 240 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 AC011451.2-201ENST00000604303 598 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.91□□□□□ -2.72
PRCDQ00LT1 AC106754.2-201ENST00000623006 233 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 AL356596.1-201ENST00000624230 379 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.91□□□□□ -2.72
PRCDQ00LT1 MIR1248-201ENST00000629190 106 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.91□□□□□ -2.72
PRCDQ00LT1 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.92□□□□□ -2.72
PRCDQ00LT1 RNU6-778P-201ENST00000363269 103 ntBASIC-1.92□□□□□ -2.72
PRCDQ00LT1 AL590002.1-201ENST00000406554 418 ntBASIC-1.92□□□□□ -2.72
PRCDQ00LT1 USP9YP13-201ENST00000417797 480 ntBASIC-1.92□□□□□ -2.72
PRCDQ00LT1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-1.92□□□□□ -2.72
PRCDQ00LT1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-1.92□□□□□ -2.72
PRCDQ00LT1 TPT1P7-201ENST00000458300 517 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms