Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.85□□□□□ -2.11
SRPXP78539 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.85□□□□□ -2.11
SRPXP78539 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.85□□□□□ -2.11
SRPXP78539 AC233702.2-202ENST00000562547 291 ntBASIC1.85□□□□□ -2.11
SRPXP78539 AC090517.1-201ENST00000569307 266 ntBASIC1.85□□□□□ -2.11
SRPXP78539 AC009127.3-201ENST00000570531 403 ntBASIC1.85□□□□□ -2.11
SRPXP78539 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.85□□□□□ -2.11
SRPXP78539 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.85□□□□□ -2.11
SRPXP78539 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.85□□□□□ -2.11
SRPXP78539 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
SRPXP78539 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
SRPXP78539 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SRPXP78539 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SRPXP78539 SNORA3A-201ENST00000364113 130 ntBASIC1.84□□□□□ -2.11
SRPXP78539 Y_RNA.259-201ENST00000364619 101 ntBASIC1.84□□□□□ -2.11
SRPXP78539 Y_RNA.384-201ENST00000383909 102 ntBASIC1.84□□□□□ -2.11
SRPXP78539 RNY4P36-201ENST00000391116 96 ntBASIC1.84□□□□□ -2.11
SRPXP78539 MIR1294-201ENST00000408503 142 ntBASIC1.84□□□□□ -2.11
SRPXP78539 U3.40-201ENST00000408706 208 ntBASIC1.84□□□□□ -2.11
SRPXP78539 AC004866.1-201ENST00000411748 78 ntBASIC1.84□□□□□ -2.11
SRPXP78539 AC027124.2-201ENST00000428249 105 ntBASIC1.84□□□□□ -2.11
SRPXP78539 CBX3P6-201ENST00000430257 527 ntBASIC1.84□□□□□ -2.11
SRPXP78539 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.84□□□□□ -2.11
SRPXP78539 RPL23AP50-201ENST00000434149 455 ntBASIC1.84□□□□□ -2.11
SRPXP78539 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.84□□□□□ -2.11
SRPXP78539 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.84□□□□□ -2.11
SRPXP78539 snoU13.30-201ENST00000458951 104 ntBASIC1.84□□□□□ -2.11
SRPXP78539 ANXA2P1-201ENST00000505539 926 ntBASIC1.84□□□□□ -2.11
SRPXP78539 AC097473.1-201ENST00000508142 408 ntBASIC1.84□□□□□ -2.11
SRPXP78539 AC234781.5-201ENST00000508429 271 ntBASIC1.84□□□□□ -2.11
SRPXP78539 Y_RNA.675-201ENST00000516389 149 ntBASIC1.84□□□□□ -2.11
SRPXP78539 Y_RNA.718-201ENST00000517110 102 ntBASIC1.84□□□□□ -2.11
SRPXP78539 AC034114.1-201ENST00000520293 285 ntBASIC1.84□□□□□ -2.11
SRPXP78539 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.84□□□□□ -2.11
SRPXP78539 AL590705.4-201ENST00000532209 134 ntBASIC1.84□□□□□ -2.11
SRPXP78539 CYCSP26-201ENST00000534107 320 ntBASIC1.84□□□□□ -2.11
SRPXP78539 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.84□□□□□ -2.11
SRPXP78539 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SRPXP78539 AC084781.2-201ENST00000615568 161 ntBASIC1.84□□□□□ -2.11
SRPXP78539 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.84□□□□□ -2.11
SRPXP78539 AC009831.4-201ENST00000620744 325 ntBASIC1.84□□□□□ -2.11
SRPXP78539 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SRPXP78539 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SRPXP78539 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.84□□□□□ -2.11
SRPXP78539 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SRPXP78539 RNU6-874P-201ENST00000362390 105 ntBASIC1.83□□□□□ -2.12
SRPXP78539 RNY1P16-201ENST00000363063 111 ntBASIC1.83□□□□□ -2.12
SRPXP78539 RNU6-26P-201ENST00000383985 107 ntBASIC1.83□□□□□ -2.12
SRPXP78539 SNORA12.2-201ENST00000391040 156 ntBASIC1.83□□□□□ -2.12
SRPXP78539 SNORA11.1-201ENST00000408133 129 ntBASIC1.83□□□□□ -2.12
SRPXP78539 RPS26P42-201ENST00000413485 326 ntBASIC1.83□□□□□ -2.12
SRPXP78539 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.83□□□□□ -2.12
SRPXP78539 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.83□□□□□ -2.12
SRPXP78539 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
SRPXP78539 Y_RNA.653-201ENST00000459091 95 ntBASIC1.83□□□□□ -2.12
SRPXP78539 SNORD19B-201ENST00000459623 84 ntBASIC1.83□□□□□ -2.12
SRPXP78539 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.83□□□□□ -2.12
SRPXP78539 ATP5EP1-201ENST00000510257 156 ntBASIC1.83□□□□□ -2.12
SRPXP78539 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.83□□□□□ -2.12
SRPXP78539 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.83□□□□□ -2.12
SRPXP78539 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.83□□□□□ -2.12
SRPXP78539 RNU6-991P-201ENST00000516168 107 ntBASIC1.83□□□□□ -2.12
SRPXP78539 RNU6-1098P-201ENST00000516772 96 ntBASIC1.83□□□□□ -2.12
SRPXP78539 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.83□□□□□ -2.12
SRPXP78539 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.83□□□□□ -2.12
SRPXP78539 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.83□□□□□ -2.12
SRPXP78539 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.83□□□□□ -2.12
SRPXP78539 MIR5701-3-201ENST00000578890 82 ntBASIC1.83□□□□□ -2.12
SRPXP78539 MIR5690-201ENST00000583739 73 ntBASIC1.83□□□□□ -2.12
SRPXP78539 MIR5701-1-201ENST00000585138 82 ntBASIC1.83□□□□□ -2.12
SRPXP78539 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.83□□□□□ -2.12
SRPXP78539 AL355802.3-201ENST00000607571 545 ntBASIC1.83□□□□□ -2.12
SRPXP78539 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.83□□□□□ -2.12
SRPXP78539 MIR5701-2-201ENST00000615634 82 ntBASIC1.83□□□□□ -2.12
SRPXP78539 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.83□□□□□ -2.12
SRPXP78539 AL359697.1-201ENST00000624879 587 ntBASIC1.83□□□□□ -2.12
SRPXP78539 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.83□□□□□ -2.12
SRPXP78539 AP000553.5-201ENST00000641933 54 ntBASIC1.83□□□□□ -2.12
SRPXP78539 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.83□□□□□ -2.12
SRPXP78539 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SRPXP78539 RNU6-222P-201ENST00000362438 107 ntBASIC1.82□□□□□ -2.12
SRPXP78539 RNU6-234P-201ENST00000365229 104 ntBASIC1.82□□□□□ -2.12
SRPXP78539 SNORA67.4-201ENST00000384688 142 ntBASIC1.82□□□□□ -2.12
SRPXP78539 MTCYBP4-201ENST00000401524 249 ntBASIC1.82□□□□□ -2.12
SRPXP78539 AL355497.1-201ENST00000406262 551 ntBASIC1.82□□□□□ -2.12
SRPXP78539 MIR1262-201ENST00000408276 93 ntBASIC1.82□□□□□ -2.12
SRPXP78539 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.82□□□□□ -2.12
SRPXP78539 COTL1P1-201ENST00000422309 375 ntBASIC1.82□□□□□ -2.12
SRPXP78539 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.82□□□□□ -2.12
SRPXP78539 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.82□□□□□ -2.12
SRPXP78539 RPL23AP83-201ENST00000434984 473 ntBASIC1.82□□□□□ -2.12
SRPXP78539 AL139109.1-201ENST00000455491 297 ntBASIC1.82□□□□□ -2.12
SRPXP78539 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.82□□□□□ -2.12
SRPXP78539 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.82□□□□□ -2.12
SRPXP78539 AP000889.1-201ENST00000530968 660 ntBASIC1.82□□□□□ -2.12
SRPXP78539 AC027288.2-201ENST00000553028 243 ntBASIC1.82□□□□□ -2.12
SRPXP78539 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.82□□□□□ -2.12
SRPXP78539 UBL5P4-201ENST00000562584 236 ntBASIC1.82□□□□□ -2.12
SRPXP78539 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.82□□□□□ -2.12
SRPXP78539 MIR4448-201ENST00000584360 86 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms