Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 RNU2-44P-201ENST00000516795 194 ntBASIC2.23□□□□□ -2.05
PRAMEP78395 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.23□□□□□ -2.05
PRAMEP78395 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.23□□□□□ -2.05
PRAMEP78395 MIR5696-201ENST00000578474 85 ntBASIC2.23□□□□□ -2.05
PRAMEP78395 AC005730.3-201ENST00000583067 366 ntBASIC2.23□□□□□ -2.05
PRAMEP78395 AC243960.4-201ENST00000600532 288 ntBASIC2.23□□□□□ -2.05
PRAMEP78395 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.23□□□□□ -2.05
PRAMEP78395 AC009831.4-201ENST00000620744 325 ntBASIC2.23□□□□□ -2.05
PRAMEP78395 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
PRAMEP78395 SCARNA4-201ENST00000629045 128 ntBASIC2.23□□□□□ -2.05
PRAMEP78395 TPTEP1-208ENST00000636884 213 ntBASIC2.23□□□□□ -2.05
PRAMEP78395 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.23□□□□□ -2.05
PRAMEP78395 Y_RNA.166-201ENST00000363730 102 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 SNORA12.2-201ENST00000391040 156 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.22□□□□□ -2.05
PRAMEP78395 BX510359.4-201ENST00000423750 193 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.22□□□□□ -2.05
PRAMEP78395 AC245102.2-201ENST00000448956 180 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 SNORA59A-201ENST00000459326 152 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.22□□□□□ -2.05
PRAMEP78395 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.22□□□□□ -2.05
PRAMEP78395 AP005660.1-201ENST00000522972 293 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 CBX3P8-201ENST00000532412 525 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.22□□□□□ -2.05
PRAMEP78395 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.22□□□□□ -2.05
PRAMEP78395 MIR5006-201ENST00000583027 110 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 AC009229.3-201ENST00000608056 282 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 AL355073.2-201ENST00000612106 557 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 AL359314.1-201ENST00000616913 261 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 AC005562.2-201ENST00000618264 111 ntBASIC2.22□□□□□ -2.05
PRAMEP78395 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRAMEP78395 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRAMEP78395 ZNF204P-201ENST00000416749 2397 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 RNU6-1164P-201ENST00000364428 107 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 RNU6-596P-201ENST00000365395 98 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 U8.10-201ENST00000384260 133 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 AL356432.1-201ENST00000405809 419 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 RNU4-14P-201ENST00000410858 122 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 RPS26P42-201ENST00000413485 326 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.21□□□□□ -2.06
PRAMEP78395 AL445305.1-201ENST00000432577 575 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 AC004386.2-201ENST00000441858 148 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 MTND3P10-201ENST00000450967 341 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 snoU13.30-201ENST00000458951 104 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 AC055731.1-201ENST00000474387 401 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 RPL7P42-201ENST00000481005 679 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 RPL30P10-201ENST00000488148 337 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.21□□□□□ -2.06
PRAMEP78395 AL117351.2-201ENST00000513571 157 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.21□□□□□ -2.06
PRAMEP78395 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.21□□□□□ -2.06
PRAMEP78395 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.21□□□□□ -2.06
PRAMEP78395 MIR4529-201ENST00000578110 78 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 MIR4672-201ENST00000583126 81 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 AC137590.2-201ENST00000619709 240 ntBASIC2.21□□□□□ -2.06
PRAMEP78395 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRAMEP78395 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.06
PRAMEP78395 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.21□□□□□ -2.06
PRAMEP78395 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PRAMEP78395 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.2□□□□□ -2.06
PRAMEP78395 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 RNU6-545P-201ENST00000362681 104 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 RNU1-76P-201ENST00000362903 159 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 SNORA72.1-201ENST00000363485 129 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 Y_RNA.303-201ENST00000364998 94 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 Y_RNA.482-201ENST00000384377 111 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 RNU6-1026P-201ENST00000384465 108 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 RNU11-3P-201ENST00000391111 133 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 RNU4-53P-201ENST00000410828 140 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 AC243428.1-201ENST00000421099 264 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 HMGN2P38-201ENST00000423806 265 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.2□□□□□ -2.06
PRAMEP78395 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.2□□□□□ -2.06
PRAMEP78395 MTCO3P8-201ENST00000453691 755 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.2□□□□□ -2.06
PRAMEP78395 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.2□□□□□ -2.06
PRAMEP78395 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 Y_RNA.708-201ENST00000516950 96 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 RNU2-19P-201ENST00000517288 84 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.2□□□□□ -2.06
PRAMEP78395 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.2□□□□□ -2.06
PRAMEP78395 AC007229.1-201ENST00000590455 412 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 AC078899.2-201ENST00000595282 212 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 7SK.7-201ENST00000603504 247 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 AC016727.1-205ENST00000605437 569 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.2□□□□□ -2.06
PRAMEP78395 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 IGHVIII-44-202ENST00000636235 289 ntBASIC2.2□□□□□ -2.06
PRAMEP78395 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PRAMEP78395 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
PRAMEP78395 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.19□□□□□ -2.06
PRAMEP78395 ZNF299P-201ENST00000406845 1804 ntBASIC2.19□□□□□ -2.06
PRAMEP78395 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
PRAMEP78395 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
PRAMEP78395 Y_RNA.99-201ENST00000363138 105 ntBASIC2.19□□□□□ -2.06
PRAMEP78395 RNU6-593P-201ENST00000364716 112 ntBASIC2.19□□□□□ -2.06
PRAMEP78395 RNU6-331P-201ENST00000384724 107 ntBASIC2.19□□□□□ -2.06
PRAMEP78395 MIR597-201ENST00000384968 97 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms