Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC090616.3-201ENST00000582184 217 ntBASIC2.12□□□□□ -2.07
LMO4P61968 MIR3616-201ENST00000584070 92 ntBASIC2.12□□□□□ -2.07
LMO4P61968 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.12□□□□□ -2.07
LMO4P61968 RPS29P30-201ENST00000600975 111 ntBASIC2.12□□□□□ -2.07
LMO4P61968 AL590808.1-201ENST00000618696 141 ntBASIC2.12□□□□□ -2.07
LMO4P61968 AC078938.1-201ENST00000620993 318 ntBASIC2.12□□□□□ -2.07
LMO4P61968 U4.3-201ENST00000621047 82 ntBASIC2.12□□□□□ -2.07
LMO4P61968 AC130454.1-201ENST00000622948 401 ntBASIC2.12□□□□□ -2.07
LMO4P61968 AC097372.5-201ENST00000623665 376 ntBASIC2.12□□□□□ -2.07
LMO4P61968 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LMO4P61968 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.12□□□□□ -2.07
LMO4P61968 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
LMO4P61968 AC010615.1-201ENST00000594254 1764 ntBASIC2.11□□□□□ -2.07
LMO4P61968 AC010329.5-201ENST00000623497 2174 ntBASIC2.11□□□□□ -2.07
LMO4P61968 SNORA51.4-201ENST00000364993 124 ntBASIC2.11□□□□□ -2.07
LMO4P61968 RNU6-898P-201ENST00000365627 104 ntBASIC2.11□□□□□ -2.07
LMO4P61968 Y_RNA.405-201ENST00000383979 100 ntBASIC2.11□□□□□ -2.07
LMO4P61968 Y_RNA.451-201ENST00000384200 100 ntBASIC2.11□□□□□ -2.07
LMO4P61968 Y_RNA.471-201ENST00000384312 102 ntBASIC2.11□□□□□ -2.07
LMO4P61968 Y_RNA.524-201ENST00000384564 100 ntBASIC2.11□□□□□ -2.07
LMO4P61968 Y_RNA.561-201ENST00000384694 100 ntBASIC2.11□□□□□ -2.07
LMO4P61968 MIR518C-201ENST00000384822 101 ntBASIC2.11□□□□□ -2.07
LMO4P61968 MIR518D-201ENST00000385014 87 ntBASIC2.11□□□□□ -2.07
LMO4P61968 MIR181B1-201ENST00000385240 110 ntBASIC2.11□□□□□ -2.07
LMO4P61968 SNORA12.2-201ENST00000391040 156 ntBASIC2.11□□□□□ -2.07
LMO4P61968 MIR190B-201ENST00000401119 79 ntBASIC2.11□□□□□ -2.07
LMO4P61968 U3.37-201ENST00000408528 213 ntBASIC2.11□□□□□ -2.07
LMO4P61968 RNU6-121P-201ENST00000410525 99 ntBASIC2.11□□□□□ -2.07
LMO4P61968 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.11□□□□□ -2.07
LMO4P61968 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.11□□□□□ -2.07
LMO4P61968 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.11□□□□□ -2.07
LMO4P61968 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.11□□□□□ -2.07
LMO4P61968 LINC01399-202ENST00000458450 244 ntBASIC2.11□□□□□ -2.07
LMO4P61968 SNORD127-201ENST00000458892 86 ntBASIC2.11□□□□□ -2.07
LMO4P61968 RN7SKP210-201ENST00000459176 261 ntBASIC2.11□□□□□ -2.07
LMO4P61968 SRIP1-201ENST00000489235 288 ntBASIC2.11□□□□□ -2.07
LMO4P61968 AC008413.1-201ENST00000511864 177 ntBASIC2.11□□□□□ -2.07
LMO4P61968 SNORA43.2-201ENST00000516652 128 ntBASIC2.11□□□□□ -2.07
LMO4P61968 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.11□□□□□ -2.07
LMO4P61968 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.11□□□□□ -2.07
LMO4P61968 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.11□□□□□ -2.07
LMO4P61968 LINC00933-203ENST00000559812 219 ntBASIC2.11□□□□□ -2.07
LMO4P61968 MIR3117-201ENST00000584034 78 ntBASIC2.11□□□□□ -2.07
LMO4P61968 AC060766.3-201ENST00000591442 263 ntBASIC2.11□□□□□ -2.07
LMO4P61968 AC091152.3-201ENST00000604227 325 ntBASIC2.11□□□□□ -2.07
LMO4P61968 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LMO4P61968 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LMO4P61968 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LMO4P61968 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.1□□□□□ -2.07
LMO4P61968 OR56A5-201ENST00000340110 738 ntBASIC2.1□□□□□ -2.07
LMO4P61968 Y_RNA.60-201ENST00000362831 98 ntBASIC2.1□□□□□ -2.07
LMO4P61968 RNU1-76P-201ENST00000362903 159 ntBASIC2.1□□□□□ -2.07
LMO4P61968 RNU6-942P-201ENST00000363002 107 ntBASIC2.1□□□□□ -2.07
LMO4P61968 RNU6-1280P-201ENST00000365211 107 ntBASIC2.1□□□□□ -2.07
LMO4P61968 Y_RNA.350-201ENST00000365409 98 ntBASIC2.1□□□□□ -2.07
LMO4P61968 RNU6-611P-201ENST00000384276 104 ntBASIC2.1□□□□□ -2.07
LMO4P61968 Y_RNA.518-201ENST00000384552 113 ntBASIC2.1□□□□□ -2.07
LMO4P61968 MTCYBP2-201ENST00000407745 171 ntBASIC2.1□□□□□ -2.07
LMO4P61968 RN7SKP284-201ENST00000411002 343 ntBASIC2.1□□□□□ -2.07
LMO4P61968 AP000275.1-201ENST00000411943 390 ntBASIC2.1□□□□□ -2.07
LMO4P61968 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.1□□□□□ -2.07
LMO4P61968 AC009310.1-201ENST00000414414 451 ntBASIC2.1□□□□□ -2.07
LMO4P61968 RPL21P38-201ENST00000418090 167 ntBASIC2.1□□□□□ -2.07
LMO4P61968 AL358453.1-201ENST00000422522 250 ntBASIC2.1□□□□□ -2.07
LMO4P61968 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LMO4P61968 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.1□□□□□ -2.07
LMO4P61968 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LMO4P61968 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.1□□□□□ -2.07
LMO4P61968 RNU6-581P-201ENST00000516214 105 ntBASIC2.1□□□□□ -2.07
LMO4P61968 RNU6-570P-201ENST00000517051 105 ntBASIC2.1□□□□□ -2.07
LMO4P61968 AP004607.1-201ENST00000524456 203 ntBASIC2.1□□□□□ -2.07
LMO4P61968 AP003733.2-201ENST00000529409 171 ntBASIC2.1□□□□□ -2.07
LMO4P61968 AC104581.2-201ENST00000572227 430 ntBASIC2.1□□□□□ -2.07
LMO4P61968 MIR3128-201ENST00000581957 66 ntBASIC2.1□□□□□ -2.07
LMO4P61968 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.1□□□□□ -2.07
LMO4P61968 MIR6134-201ENST00000617606 109 ntBASIC2.1□□□□□ -2.07
LMO4P61968 AC241585.2-209ENST00000638217 143 ntBASIC2.1□□□□□ -2.07
LMO4P61968 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LMO4P61968 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LMO4P61968 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LMO4P61968 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LMO4P61968 Y_RNA.14-201ENST00000362415 103 ntBASIC2.09□□□□□ -2.07
LMO4P61968 Y_RNA.27-201ENST00000362540 103 ntBASIC2.09□□□□□ -2.07
LMO4P61968 Y_RNA.183-201ENST00000363882 113 ntBASIC2.09□□□□□ -2.07
LMO4P61968 RNU1-100P-201ENST00000365255 165 ntBASIC2.09□□□□□ -2.07
LMO4P61968 Y_RNA.358-201ENST00000365491 99 ntBASIC2.09□□□□□ -2.07
LMO4P61968 Y_RNA.562-201ENST00000384695 113 ntBASIC2.09□□□□□ -2.07
LMO4P61968 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LMO4P61968 AL590004.2-201ENST00000404787 371 ntBASIC2.09□□□□□ -2.07
LMO4P61968 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.09□□□□□ -2.07
LMO4P61968 AL590556.1-201ENST00000423231 483 ntBASIC2.09□□□□□ -2.07
LMO4P61968 OOSP1P1-201ENST00000423265 274 ntBASIC2.09□□□□□ -2.07
LMO4P61968 Z82188.1-201ENST00000436709 154 ntBASIC2.09□□□□□ -2.07
LMO4P61968 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LMO4P61968 AL445687.1-201ENST00000439946 251 ntBASIC2.09□□□□□ -2.07
LMO4P61968 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.09□□□□□ -2.07
LMO4P61968 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.09□□□□□ -2.07
LMO4P61968 U8.22-201ENST00000459141 133 ntBASIC2.09□□□□□ -2.07
LMO4P61968 TRBV12-1-201ENST00000479785 344 ntBASIC2.09□□□□□ -2.07
LMO4P61968 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms