Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RNU4-48P-201ENST00000365559 182 ntBASIC0.18□□□□□ -2.38
VBP1P61758 SNORD89-201ENST00000390981 114 ntBASIC0.18□□□□□ -2.38
VBP1P61758 RNA5SP323-201ENST00000391094 133 ntBASIC0.18□□□□□ -2.38
VBP1P61758 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.18□□□□□ -2.38
VBP1P61758 NFU1P2-201ENST00000448700 469 ntBASIC0.18□□□□□ -2.38
VBP1P61758 MTND1P12-201ENST00000455231 147 ntBASIC0.18□□□□□ -2.38
VBP1P61758 AK3P2-201ENST00000507976 429 ntBASIC0.18□□□□□ -2.38
VBP1P61758 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.18□□□□□ -2.38
VBP1P61758 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.18□□□□□ -2.38
VBP1P61758 AC027419.1-201ENST00000522976 328 ntBASIC0.18□□□□□ -2.38
VBP1P61758 AP000889.1-201ENST00000530968 660 ntBASIC0.18□□□□□ -2.38
VBP1P61758 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.18□□□□□ -2.38
VBP1P61758 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.18□□□□□ -2.38
VBP1P61758 AC025627.3-201ENST00000582078 182 ntBASIC0.18□□□□□ -2.38
VBP1P61758 AC092354.1-201ENST00000606057 376 ntBASIC0.18□□□□□ -2.38
VBP1P61758 AC243829.6-201ENST00000612652 106 ntBASIC0.18□□□□□ -2.38
VBP1P61758 AC068787.1-201ENST00000623908 691 ntBASIC0.18□□□□□ -2.38
VBP1P61758 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.18□□□□□ -2.38
VBP1P61758 MIRLET7D-201ENST00000362263 87 ntBASIC0.17□□□□□ -2.38
VBP1P61758 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
VBP1P61758 RNY4P24-201ENST00000362735 96 ntBASIC0.17□□□□□ -2.38
VBP1P61758 RNU4-1-201ENST00000363925 141 ntBASIC0.17□□□□□ -2.38
VBP1P61758 RNU6-1303P-201ENST00000364841 107 ntBASIC0.17□□□□□ -2.38
VBP1P61758 RNU6-163P-201ENST00000384396 106 ntBASIC0.17□□□□□ -2.38
VBP1P61758 MIR549A-201ENST00000385268 96 ntBASIC0.17□□□□□ -2.38
VBP1P61758 RNU6-440P-201ENST00000390882 105 ntBASIC0.17□□□□□ -2.38
VBP1P61758 MTCYBP36-201ENST00000404146 440 ntBASIC0.17□□□□□ -2.38
VBP1P61758 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.17□□□□□ -2.38
VBP1P61758 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.17□□□□□ -2.38
VBP1P61758 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
VBP1P61758 AC108729.3-201ENST00000513484 108 ntBASIC0.17□□□□□ -2.38
VBP1P61758 RNU6-917P-201ENST00000516294 104 ntBASIC0.17□□□□□ -2.38
VBP1P61758 RNU6-948P-201ENST00000516374 107 ntBASIC0.17□□□□□ -2.38
VBP1P61758 AC109479.2-201ENST00000517842 174 ntBASIC0.17□□□□□ -2.38
VBP1P61758 AC087854.1-201ENST00000519706 414 ntBASIC0.17□□□□□ -2.38
VBP1P61758 MTATP6P15-201ENST00000527233 835 ntBASIC0.17□□□□□ -2.38
VBP1P61758 Z99497.2-201ENST00000603634 310 ntBASIC0.17□□□□□ -2.38
VBP1P61758 AC097065.2-201ENST00000608159 533 ntBASIC0.17□□□□□ -2.38
VBP1P61758 7SK.10-201ENST00000621414 298 ntBASIC0.17□□□□□ -2.38
VBP1P61758 AP000943.4-201ENST00000622912 357 ntBASIC0.17□□□□□ -2.38
VBP1P61758 AC100810.6-201ENST00000638068 285 ntBASIC0.17□□□□□ -2.38
VBP1P61758 RNU1-93P-201ENST00000364704 169 ntBASIC0.16□□□□□ -2.38
VBP1P61758 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
VBP1P61758 RNU6-1093P-201ENST00000391194 107 ntBASIC0.16□□□□□ -2.38
VBP1P61758 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
VBP1P61758 MIR1295A-201ENST00000408463 79 ntBASIC0.16□□□□□ -2.38
VBP1P61758 RN7SKP200-201ENST00000410564 320 ntBASIC0.16□□□□□ -2.38
VBP1P61758 SNAP23P1-201ENST00000433229 246 ntBASIC0.16□□□□□ -2.38
VBP1P61758 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.16□□□□□ -2.38
VBP1P61758 AC116347.2-201ENST00000514912 523 ntBASIC0.16□□□□□ -2.38
VBP1P61758 RNU6-276P-201ENST00000516114 96 ntBASIC0.16□□□□□ -2.38
VBP1P61758 AC024995.1-201ENST00000523014 93 ntBASIC0.16□□□□□ -2.38
VBP1P61758 AP002001.1-203ENST00000534002 267 ntBASIC0.16□□□□□ -2.38
VBP1P61758 MIR4753-201ENST00000585119 83 ntBASIC0.16□□□□□ -2.38
VBP1P61758 FAM106DP-201ENST00000586416 501 ntBASIC0.16□□□□□ -2.38
VBP1P61758 RPL17P51-201ENST00000605218 238 ntBASIC0.16□□□□□ -2.38
VBP1P61758 AC017083.3-201ENST00000609955 700 ntBASIC0.16□□□□□ -2.38
VBP1P61758 RNU6-1192P-201ENST00000612197 107 ntBASIC0.16□□□□□ -2.38
VBP1P61758 AC005520.5-201ENST00000613926 164 ntBASIC0.16□□□□□ -2.38
VBP1P61758 RNU6-489P-201ENST00000618289 107 ntBASIC0.16□□□□□ -2.38
VBP1P61758 AC019226.2-201ENST00000625973 424 ntBASIC0.16□□□□□ -2.38
VBP1P61758 SNORA43.4-201ENST00000629559 138 ntBASIC0.16□□□□□ -2.38
VBP1P61758 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
VBP1P61758 RNU6-562P-201ENST00000362731 107 ntBASIC0.15□□□□□ -2.39
VBP1P61758 RNU6-975P-201ENST00000384296 105 ntBASIC0.15□□□□□ -2.39
VBP1P61758 RNU6-809P-201ENST00000384461 107 ntBASIC0.15□□□□□ -2.39
VBP1P61758 RNU6-45P-201ENST00000384471 107 ntBASIC0.15□□□□□ -2.39
VBP1P61758 MIR660-201ENST00000385235 97 ntBASIC0.15□□□□□ -2.39
VBP1P61758 MIR300-201ENST00000401138 83 ntBASIC0.15□□□□□ -2.39
VBP1P61758 RNU2-39P-201ENST00000410604 198 ntBASIC0.15□□□□□ -2.39
VBP1P61758 AC090960.1-201ENST00000421072 306 ntBASIC0.15□□□□□ -2.39
VBP1P61758 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.15□□□□□ -2.39
VBP1P61758 AC244098.3-201ENST00000424803 96 ntBASIC0.15□□□□□ -2.39
VBP1P61758 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.15□□□□□ -2.39
VBP1P61758 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.15□□□□□ -2.39
VBP1P61758 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.15□□□□□ -2.39
VBP1P61758 AL445305.1-201ENST00000432577 575 ntBASIC0.15□□□□□ -2.39
VBP1P61758 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.15□□□□□ -2.39
VBP1P61758 RPL22P17-201ENST00000438729 315 ntBASIC0.15□□□□□ -2.39
VBP1P61758 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.15□□□□□ -2.39
VBP1P61758 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.15□□□□□ -2.39
VBP1P61758 FABP5P5-201ENST00000515537 406 ntBASIC0.15□□□□□ -2.39
VBP1P61758 RNU2-34P-201ENST00000516534 121 ntBASIC0.15□□□□□ -2.39
VBP1P61758 RNA5SP102-201ENST00000516865 106 ntBASIC0.15□□□□□ -2.39
VBP1P61758 RNU6-685P-201ENST00000517088 95 ntBASIC0.15□□□□□ -2.39
VBP1P61758 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.15□□□□□ -2.39
VBP1P61758 AP003181.2-201ENST00000528941 181 ntBASIC0.15□□□□□ -2.39
VBP1P61758 AC090049.2-201ENST00000550377 109 ntBASIC0.15□□□□□ -2.39
VBP1P61758 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.15□□□□□ -2.39
VBP1P61758 ZNF519P3-201ENST00000557158 1032 ntBASIC0.15□□□□□ -2.39
VBP1P61758 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.15□□□□□ -2.39
VBP1P61758 AC023827.1-201ENST00000569247 97 ntBASIC0.15□□□□□ -2.39
VBP1P61758 MIR4498-201ENST00000577599 66 ntBASIC0.15□□□□□ -2.39
VBP1P61758 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.15□□□□□ -2.39
VBP1P61758 AL513423.1-201ENST00000621695 132 ntBASIC0.15□□□□□ -2.39
VBP1P61758 Y_RNA.22-201ENST00000362492 102 ntBASIC0.14□□□□□ -2.39
VBP1P61758 Y_RNA.97-201ENST00000363094 102 ntBASIC0.14□□□□□ -2.39
VBP1P61758 VTRNA1-3-201ENST00000365645 89 ntBASIC0.14□□□□□ -2.39
VBP1P61758 RNU6-116P-201ENST00000384042 109 ntBASIC0.14□□□□□ -2.39
VBP1P61758 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms