Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SUMO3P55854 AC096644.4-201ENST00000563417 2912 ntBASIC2.73□□□□□ -1.97
SUMO3P55854 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SUMO3P55854 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SUMO3P55854 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SUMO3P55854 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
SUMO3P55854 MIR422A-201ENST00000362286 90 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 RNU4-50P-201ENST00000364361 141 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 RNU6-234P-201ENST00000365229 104 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 SNORA9.2-201ENST00000365361 133 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 RNU6-793P-201ENST00000384233 104 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 RNU6-851P-201ENST00000384565 107 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 RNU6-823P-201ENST00000391042 103 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 RN7SKP58-201ENST00000411010 305 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 RPS3AP12-201ENST00000443616 753 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 RNU5F-4P-201ENST00000516581 114 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 RNU6-1098P-201ENST00000516772 96 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 CBX3P7-201ENST00000532876 502 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.72□□□□□ -1.97
SUMO3P55854 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.72□□□□□ -1.97
SUMO3P55854 MIR4325-201ENST00000583049 90 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 AC124312.5-201ENST00000604451 268 ntBASIC2.72□□□□□ -1.97
SUMO3P55854 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SUMO3P55854 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.72□□□□□ -1.97
SUMO3P55854 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
SUMO3P55854 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SUMO3P55854 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SUMO3P55854 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SUMO3P55854 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SUMO3P55854 Y_RNA.145-201ENST00000363527 102 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 SNORA63.7-201ENST00000365579 123 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 Y_RNA.380-201ENST00000365663 111 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 RNU6-708P-201ENST00000384217 107 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 Y_RNA.455-201ENST00000384230 98 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SUMO3P55854 RNU6-1001P-201ENST00000411265 100 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.71□□□□□ -1.98
SUMO3P55854 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.71□□□□□ -1.98
SUMO3P55854 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.71□□□□□ -1.98
SUMO3P55854 AC010095.1-201ENST00000443543 144 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.71□□□□□ -1.98
SUMO3P55854 AC007395.1-201ENST00000451333 677 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.71□□□□□ -1.98
SUMO3P55854 RN7SL75P-201ENST00000461926 281 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.71□□□□□ -1.98
SUMO3P55854 RNA5SP385-201ENST00000515947 110 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 MIR449C-201ENST00000516047 92 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 RNU6-764P-201ENST00000516396 105 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 Y_RNA.683-201ENST00000516508 93 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 RN7SKP57-201ENST00000517248 293 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 AL360085.1-201ENST00000604713 532 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 PART1_1.1-201ENST00000611761 217 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.71□□□□□ -1.98
SUMO3P55854 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
SUMO3P55854 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
SUMO3P55854 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SUMO3P55854 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.71□□□□□ -1.98
SUMO3P55854 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.7□□□□□ -1.98
SUMO3P55854 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
SUMO3P55854 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
SUMO3P55854 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
SUMO3P55854 AC135776.4-201ENST00000624300 1904 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SUMO3P55854 MIR208A-201ENST00000362287 71 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 RNA5SP361-201ENST00000362686 118 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 U8.9-201ENST00000365667 134 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 SNORA51.11-201ENST00000384442 131 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 Y_RNA.527-201ENST00000384573 102 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 Y_RNA.551-201ENST00000384661 102 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 Y_RNA.595-201ENST00000410403 105 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.7□□□□□ -1.98
SUMO3P55854 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 AC091179.3-201ENST00000474761 144 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.7□□□□□ -1.98
SUMO3P55854 RNU6-327P-201ENST00000516270 127 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 RNU6-1012P-201ENST00000516606 109 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 RPPH1-2P-201ENST00000516688 293 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 RNU6-965P-201ENST00000516721 96 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.7□□□□□ -1.98
SUMO3P55854 AL390123.1-201ENST00000603216 237 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 SNORD11B-201ENST00000607707 90 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.7□□□□□ -1.98
SUMO3P55854 AC007318.2-201ENST00000620999 243 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 MTND5P35-201ENST00000557537 1720 ntBASIC2.7□□□□□ -1.98
SUMO3P55854 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.7□□□□□ -1.98
SUMO3P55854 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
SUMO3P55854 SNORD78.2-201ENST00000391076 69 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 MIR1252-201ENST00000408861 65 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 SNORD12B-201ENST00000410433 91 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 RNU2-48P-201ENST00000410694 191 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 AC004866.1-201ENST00000411748 78 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.69□□□□□ -1.98
SUMO3P55854 SDAD1P3-201ENST00000427380 333 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 PCNPP5-201ENST00000452246 481 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.69□□□□□ -1.98
SUMO3P55854 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.69□□□□□ -1.98
SUMO3P55854 MZT1P2-201ENST00000604387 248 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 AL121655.1-201ENST00000605811 308 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 AC116312.1-201ENST00000606841 314 ntBASIC2.69□□□□□ -1.98
SUMO3P55854 AC010205.1-201ENST00000616668 449 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms