Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-112P-201ENST00000363599 104 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 Y_RNA.231-201ENST00000364358 102 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 RNU6-338P-201ENST00000383888 105 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 EIF4E2P1-201ENST00000393781 255 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 MIR1323-201ENST00000408090 73 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 RNU6-1068P-201ENST00000410958 103 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 NCOR1P3-201ENST00000420479 303 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 MRPS10P2-201ENST00000431226 381 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 USP9YP28-201ENST00000435142 589 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.43□□□□□ -2.18
PKNOX1P55347 U8.21-201ENST00000459536 136 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 AC107401.1-201ENST00000503426 685 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 AC019235.1-201ENST00000503847 207 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 FAM206BP-201ENST00000510179 541 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 RPL23AP94-201ENST00000512518 302 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.43□□□□□ -2.18
PKNOX1P55347 MRPS36P4-201ENST00000534436 298 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.43□□□□□ -2.18
PKNOX1P55347 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.43□□□□□ -2.18
PKNOX1P55347 SNORD53B-201ENST00000577887 78 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 MIR5094-201ENST00000578766 85 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 RPL17P51-201ENST00000605218 238 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.43□□□□□ -2.18
PKNOX1P55347 RNU6-89P-201ENST00000606519 100 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.43□□□□□ -2.18
PKNOX1P55347 AC092954.2-201ENST00000609103 430 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 AC013412.1-201ENST00000610687 192 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 AC073534.2-201ENST00000620377 381 ntBASIC1.43□□□□□ -2.18
PKNOX1P55347 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
PKNOX1P55347 MIR424-201ENST00000362227 98 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 RNU1-62P-201ENST00000362599 164 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 Y_RNA.123-201ENST00000363338 102 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 RNU6-296P-201ENST00000384608 107 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
PKNOX1P55347 RNU6-325P-201ENST00000411132 105 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 MTCO1P20-201ENST00000425366 358 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 AC099677.2-201ENST00000436385 175 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.42□□□□□ -2.18
PKNOX1P55347 AL357134.1-201ENST00000445848 426 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.42□□□□□ -2.18
PKNOX1P55347 AC083904.1-201ENST00000487828 231 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 RPS23P5-201ENST00000495419 428 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 YWHAEP4-201ENST00000505390 198 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.42□□□□□ -2.18
PKNOX1P55347 AC116337.1-201ENST00000509680 687 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.42□□□□□ -2.18
PKNOX1P55347 AL512360.1-201ENST00000555346 234 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 SNORA59B-202ENST00000578183 701 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 CPDP1-201ENST00000579660 283 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 AC016727.2-201ENST00000603988 621 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.42□□□□□ -2.18
PKNOX1P55347 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
PKNOX1P55347 RMST_3.1-201ENST00000611651 109 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 AC068205.3-201ENST00000636385 468 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 AC068137.3-201ENST00000639191 341 ntBASIC1.42□□□□□ -2.18
PKNOX1P55347 RNU6-545P-201ENST00000362681 104 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 RNU6-1286P-201ENST00000383871 107 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 RNU6-1026P-201ENST00000384465 108 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.41□□□□□ -2.18
PKNOX1P55347 ARL5AP1-201ENST00000418991 388 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.41□□□□□ -2.18
PKNOX1P55347 AL513185.2-201ENST00000425543 193 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.41□□□□□ -2.18
PKNOX1P55347 AC007395.1-201ENST00000451333 677 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.41□□□□□ -2.18
PKNOX1P55347 snoU13.15-201ENST00000459407 104 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 AC005908.1-201ENST00000468701 347 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 AF186996.7-201ENST00000492781 209 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 RNU6-1332P-201ENST00000516666 104 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
PKNOX1P55347 AC100830.2-201ENST00000581636 240 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 AC016925.2-201ENST00000605108 242 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.41□□□□□ -2.18
PKNOX1P55347 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.41□□□□□ -2.18
PKNOX1P55347 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.41□□□□□ -2.18
PKNOX1P55347 OR4G1P-203ENST00000641984 1631 ntBASIC1.4□□□□□ -2.18
PKNOX1P55347 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
PKNOX1P55347 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.4□□□□□ -2.19
PKNOX1P55347 RNU6-562P-201ENST00000362731 107 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 RNA5SP190-201ENST00000365222 118 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 AC004866.1-201ENST00000411748 78 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 RPS26P42-201ENST00000413485 326 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 CYCSP49-201ENST00000420810 319 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
PKNOX1P55347 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.4□□□□□ -2.19
PKNOX1P55347 Z83846.1-201ENST00000446798 265 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
PKNOX1P55347 AC091435.1-201ENST00000505442 584 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.4□□□□□ -2.19
PKNOX1P55347 Y_RNA.704-201ENST00000516851 102 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 SUMO2P18-201ENST00000518873 252 ntBASIC1.4□□□□□ -2.19
PKNOX1P55347 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.4□□□□□ -2.19
PKNOX1P55347 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms