Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.89□□□□□ -2.11
VCPP55072 AP000763.2-201ENST00000540641 163 ntBASIC1.89□□□□□ -2.11
VCPP55072 MIR3136-201ENST00000583498 78 ntBASIC1.89□□□□□ -2.11
VCPP55072 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.89□□□□□ -2.11
VCPP55072 AL078605.1-201ENST00000603529 500 ntBASIC1.89□□□□□ -2.11
VCPP55072 AL034555.1-201ENST00000604816 211 ntBASIC1.89□□□□□ -2.11
VCPP55072 AC024614.3-201ENST00000637860 256 ntBASIC1.89□□□□□ -2.11
VCPP55072 RNU4-12P-201ENST00000365233 139 ntBASIC1.88□□□□□ -2.11
VCPP55072 RNU6-142P-201ENST00000384019 107 ntBASIC1.88□□□□□ -2.11
VCPP55072 SNORA8-201ENST00000384574 139 ntBASIC1.88□□□□□ -2.11
VCPP55072 MIR450B-201ENST00000401182 78 ntBASIC1.88□□□□□ -2.11
VCPP55072 RNU2-48P-201ENST00000410694 191 ntBASIC1.88□□□□□ -2.11
VCPP55072 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
VCPP55072 SNRPEP10-201ENST00000420249 274 ntBASIC1.88□□□□□ -2.11
VCPP55072 AL590556.1-201ENST00000423231 483 ntBASIC1.88□□□□□ -2.11
VCPP55072 AL133396.1-201ENST00000432048 687 ntBASIC1.88□□□□□ -2.11
VCPP55072 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.88□□□□□ -2.11
VCPP55072 HMGN2P26-201ENST00000463169 339 ntBASIC1.88□□□□□ -2.11
VCPP55072 AC091874.1-201ENST00000511402 339 ntBASIC1.88□□□□□ -2.11
VCPP55072 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.88□□□□□ -2.11
VCPP55072 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.88□□□□□ -2.11
VCPP55072 Y_RNA.665-201ENST00000516177 98 ntBASIC1.88□□□□□ -2.11
VCPP55072 RNA5SP220-201ENST00000516298 104 ntBASIC1.88□□□□□ -2.11
VCPP55072 AC018630.3-201ENST00000542637 96 ntBASIC1.88□□□□□ -2.11
VCPP55072 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.88□□□□□ -2.11
VCPP55072 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
VCPP55072 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.88□□□□□ -2.11
VCPP55072 FAM157A-202ENST00000615155 405 ntBASIC1.88□□□□□ -2.11
VCPP55072 MTND4P23-201ENST00000447723 1363 ntBASIC1.87□□□□□ -2.11
VCPP55072 RNU4-15P-201ENST00000362613 141 ntBASIC1.87□□□□□ -2.11
VCPP55072 Y_RNA.374-201ENST00000365606 101 ntBASIC1.87□□□□□ -2.11
VCPP55072 RNU6-214P-201ENST00000384130 107 ntBASIC1.87□□□□□ -2.11
VCPP55072 RNU6-332P-201ENST00000391193 108 ntBASIC1.87□□□□□ -2.11
VCPP55072 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.87□□□□□ -2.11
VCPP55072 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.87□□□□□ -2.11
VCPP55072 AC008628.2-201ENST00000502605 298 ntBASIC1.87□□□□□ -2.11
VCPP55072 AC016632.1-201ENST00000503994 196 ntBASIC1.87□□□□□ -2.11
VCPP55072 RNU6-1332P-201ENST00000516666 104 ntBASIC1.87□□□□□ -2.11
VCPP55072 SNORA31.16-201ENST00000516773 139 ntBASIC1.87□□□□□ -2.11
VCPP55072 RNU6-612P-201ENST00000516909 102 ntBASIC1.87□□□□□ -2.11
VCPP55072 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.87□□□□□ -2.11
VCPP55072 AC022616.8-201ENST00000533569 253 ntBASIC1.87□□□□□ -2.11
VCPP55072 TRAV32-201ENST00000553993 340 ntBASIC1.87□□□□□ -2.11
VCPP55072 AC104458.1-201ENST00000608243 463 ntBASIC1.87□□□□□ -2.11
VCPP55072 AC068944.2-201ENST00000610373 403 ntBASIC1.87□□□□□ -2.11
VCPP55072 RMST_3.1-201ENST00000611651 109 ntBASIC1.87□□□□□ -2.11
VCPP55072 AL132822.1-201ENST00000617063 513 ntBASIC1.87□□□□□ -2.11
VCPP55072 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
VCPP55072 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VCPP55072 AC092268.1-201ENST00000342691 405 ntBASIC1.86□□□□□ -2.11
VCPP55072 RNU6-254P-201ENST00000363377 107 ntBASIC1.86□□□□□ -2.11
VCPP55072 RNU6-611P-201ENST00000384276 104 ntBASIC1.86□□□□□ -2.11
VCPP55072 MIR1294-201ENST00000408503 142 ntBASIC1.86□□□□□ -2.11
VCPP55072 CBX3P6-201ENST00000430257 527 ntBASIC1.86□□□□□ -2.11
VCPP55072 IFNA20P-201ENST00000436840 528 ntBASIC1.86□□□□□ -2.11
VCPP55072 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.86□□□□□ -2.11
VCPP55072 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.86□□□□□ -2.11
VCPP55072 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.86□□□□□ -2.11
VCPP55072 RPL9P9-202ENST00000466501 579 ntBASIC1.86□□□□□ -2.11
VCPP55072 AC145146.1-201ENST00000496370 254 ntBASIC1.86□□□□□ -2.11
VCPP55072 AC025465.4-201ENST00000513422 638 ntBASIC1.86□□□□□ -2.11
VCPP55072 RNU6-965P-201ENST00000516721 96 ntBASIC1.86□□□□□ -2.11
VCPP55072 MTND1P5-201ENST00000517906 940 ntBASIC1.86□□□□□ -2.11
VCPP55072 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.86□□□□□ -2.11
VCPP55072 AC100830.2-201ENST00000581636 240 ntBASIC1.86□□□□□ -2.11
VCPP55072 CTHRC1P1-201ENST00000605383 469 ntBASIC1.86□□□□□ -2.11
VCPP55072 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VCPP55072 Y_RNA.6-201ENST00000362350 114 ntBASIC1.85□□□□□ -2.11
VCPP55072 Y_RNA.89-201ENST00000363031 102 ntBASIC1.85□□□□□ -2.11
VCPP55072 RNU4-56P-201ENST00000364700 142 ntBASIC1.85□□□□□ -2.11
VCPP55072 SNORD48-201ENST00000364953 64 ntBASIC1.85□□□□□ -2.11
VCPP55072 RNU6-877P-201ENST00000383868 107 ntBASIC1.85□□□□□ -2.11
VCPP55072 Y_RNA.504-201ENST00000384481 104 ntBASIC1.85□□□□□ -2.11
VCPP55072 Y_RNA.573-201ENST00000384763 105 ntBASIC1.85□□□□□ -2.11
VCPP55072 SNORA26.3-201ENST00000391119 136 ntBASIC1.85□□□□□ -2.11
VCPP55072 RNA5SP212-201ENST00000391223 107 ntBASIC1.85□□□□□ -2.11
VCPP55072 BTF3L4P2-201ENST00000392798 346 ntBASIC1.85□□□□□ -2.11
VCPP55072 UBE2V1P4-201ENST00000425374 344 ntBASIC1.85□□□□□ -2.11
VCPP55072 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.85□□□□□ -2.11
VCPP55072 MTND2P29-201ENST00000438595 412 ntBASIC1.85□□□□□ -2.11
VCPP55072 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.85□□□□□ -2.11
VCPP55072 AMD1P1-201ENST00000457220 922 ntBASIC1.85□□□□□ -2.11
VCPP55072 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.85□□□□□ -2.11
VCPP55072 ATP5EP1-201ENST00000510257 156 ntBASIC1.85□□□□□ -2.11
VCPP55072 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.85□□□□□ -2.11
VCPP55072 SCOCP1-201ENST00000554676 349 ntBASIC1.85□□□□□ -2.11
VCPP55072 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
VCPP55072 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
VCPP55072 AC078795.3-201ENST00000602913 472 ntBASIC1.85□□□□□ -2.11
VCPP55072 AL360085.1-201ENST00000604713 532 ntBASIC1.85□□□□□ -2.11
VCPP55072 AL359314.1-201ENST00000616913 261 ntBASIC1.85□□□□□ -2.11
VCPP55072 AL450472.1-202ENST00000637286 180 ntBASIC1.85□□□□□ -2.11
VCPP55072 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.85□□□□□ -2.11
VCPP55072 MTND5P35-201ENST00000557537 1720 ntBASIC1.85□□□□□ -2.11
VCPP55072 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.85□□□□□ -2.11
VCPP55072 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
VCPP55072 RNU6-227P-201ENST00000362865 103 ntBASIC1.84□□□□□ -2.11
VCPP55072 SNORD113-7-201ENST00000363762 77 ntBASIC1.84□□□□□ -2.11
VCPP55072 RNU6-1317P-201ENST00000364582 104 ntBASIC1.84□□□□□ -2.11
VCPP55072 Y_RNA.453-201ENST00000384223 109 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 594.9 ms