Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 snoU13.6-201ENST00000458785 104 ntBASIC2.5□□□□□ -2.01
NR1H2P55055 RNU7-152P-201ENST00000458982 64 ntBASIC2.5□□□□□ -2.01
NR1H2P55055 AF186996.7-201ENST00000492781 209 ntBASIC2.5□□□□□ -2.01
NR1H2P55055 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.5□□□□□ -2.01
NR1H2P55055 HMGN1P13-201ENST00000505795 138 ntBASIC2.5□□□□□ -2.01
NR1H2P55055 AC093303.1-201ENST00000514549 295 ntBASIC2.5□□□□□ -2.01
NR1H2P55055 SNORA4.4-201ENST00000515921 135 ntBASIC2.5□□□□□ -2.01
NR1H2P55055 AC009127.3-201ENST00000570531 403 ntBASIC2.5□□□□□ -2.01
NR1H2P55055 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.5□□□□□ -2.01
NR1H2P55055 AC080078.3-201ENST00000605407 463 ntBASIC2.5□□□□□ -2.01
NR1H2P55055 SNORD14A-201ENST00000606526 91 ntBASIC2.5□□□□□ -2.01
NR1H2P55055 AL132822.1-201ENST00000617063 513 ntBASIC2.5□□□□□ -2.01
NR1H2P55055 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NR1H2P55055 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NR1H2P55055 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
NR1H2P55055 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
NR1H2P55055 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NR1H2P55055 MTND5P10-201ENST00000603719 1809 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
NR1H2P55055 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NR1H2P55055 Y_RNA.11-201ENST00000362375 109 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 RNY1P16-201ENST00000363063 111 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 SNORA41-201ENST00000384675 132 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NR1H2P55055 MIR208B-201ENST00000401172 77 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 SRIP3-201ENST00000413200 219 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.49□□□□□ -2.01
NR1H2P55055 AL358453.1-201ENST00000422522 250 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.49□□□□□ -2.01
NR1H2P55055 MTND4P28-201ENST00000426217 387 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 Z82188.1-201ENST00000436709 154 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 AL109933.2-201ENST00000452651 260 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 AC087477.1-201ENST00000465747 340 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 AC027575.1-201ENST00000481064 460 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 AC022493.2-201ENST00000506122 481 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.49□□□□□ -2.01
NR1H2P55055 RNU6-470P-201ENST00000515954 104 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 HSPE1P18-201ENST00000517602 280 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.49□□□□□ -2.01
NR1H2P55055 MIR3945-201ENST00000581853 98 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 MIR4435-1-201ENST00000582552 80 ntBASIC2.49□□□□□ -2.01
NR1H2P55055 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.49□□□□□ -2.01
NR1H2P55055 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.49□□□□□ -2.01
NR1H2P55055 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
NR1H2P55055 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
NR1H2P55055 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NR1H2P55055 AC062016.1-201ENST00000355719 319 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 RNU4-9P-201ENST00000364951 139 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 Y_RNA.315-201ENST00000365117 102 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 MIR196B-201ENST00000384852 84 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 MIR29C-201ENST00000385231 88 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 AL357139.1-201ENST00000407792 426 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 MIR1261-201ENST00000408659 82 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 RNA5SP508-201ENST00000411327 119 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 RPS20P15-201ENST00000412792 311 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 RPS26P42-201ENST00000413485 326 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.48□□□□□ -2.01
NR1H2P55055 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.48□□□□□ -2.01
NR1H2P55055 MIR2053-201ENST00000459295 91 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.48□□□□□ -2.01
NR1H2P55055 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.48□□□□□ -2.01
NR1H2P55055 RNU6-264P-201ENST00000517134 104 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.48□□□□□ -2.01
NR1H2P55055 AL590705.4-201ENST00000532209 134 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 AC010928.2-201ENST00000588017 287 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
NR1H2P55055 7SK.7-201ENST00000603504 247 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 AL160413.1-201ENST00000622780 310 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 SCARNA4-201ENST00000629045 128 ntBASIC2.48□□□□□ -2.01
NR1H2P55055 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NR1H2P55055 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NR1H2P55055 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.47□□□□□ -2.01
NR1H2P55055 RNA5SP210-201ENST00000391034 120 ntBASIC2.47□□□□□ -2.01
NR1H2P55055 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.47□□□□□ -2.01
NR1H2P55055 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.47□□□□□ -2.01
NR1H2P55055 RN7SKP210-201ENST00000459176 261 ntBASIC2.47□□□□□ -2.01
NR1H2P55055 TRBV12-1-201ENST00000479785 344 ntBASIC2.47□□□□□ -2.01
NR1H2P55055 RPL17P19-201ENST00000489069 552 ntBASIC2.47□□□□□ -2.01
NR1H2P55055 AC107222.1-201ENST00000510899 637 ntBASIC2.47□□□□□ -2.01
NR1H2P55055 RNU6-1170P-201ENST00000515974 106 ntBASIC2.47□□□□□ -2.01
NR1H2P55055 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.47□□□□□ -2.01
NR1H2P55055 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.47□□□□□ -2.01
NR1H2P55055 AC079600.2-201ENST00000550076 130 ntBASIC2.47□□□□□ -2.01
NR1H2P55055 PRELID2P1-201ENST00000552837 301 ntBASIC2.47□□□□□ -2.01
NR1H2P55055 MIR5092-201ENST00000583139 88 ntBASIC2.47□□□□□ -2.01
NR1H2P55055 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.47□□□□□ -2.01
NR1H2P55055 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
NR1H2P55055 RNU6-1040P-201ENST00000383974 107 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 Y_RNA.405-201ENST00000383979 100 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 Y_RNA.451-201ENST00000384200 100 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 Y_RNA.524-201ENST00000384564 100 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 Y_RNA.561-201ENST00000384694 100 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 MIR32-201ENST00000384965 70 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 MIR9-1-201ENST00000385198 89 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 RNU2-48P-201ENST00000410694 191 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 MTCO3P29-201ENST00000432119 779 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 UBE2V1P7-201ENST00000446395 340 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 snoU13.30-201ENST00000458951 104 ntBASIC2.46□□□□□ -2.02
NR1H2P55055 SNORD109B-201ENST00000458961 67 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms