Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNA5SP467-201ENST00000391274 118 ntBASIC0.32□□□□□ -2.36
NUP98P52948 RPS3AP37-201ENST00000419176 745 ntBASIC0.32□□□□□ -2.36
NUP98P52948 RPL23AP95-201ENST00000426806 265 ntBASIC0.32□□□□□ -2.36
NUP98P52948 AC092423.1-201ENST00000430165 186 ntBASIC0.32□□□□□ -2.36
NUP98P52948 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.32□□□□□ -2.36
NUP98P52948 AC007547.1-201ENST00000462177 490 ntBASIC0.32□□□□□ -2.36
NUP98P52948 AP000797.1-201ENST00000478870 387 ntBASIC0.32□□□□□ -2.36
NUP98P52948 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.32□□□□□ -2.36
NUP98P52948 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.32□□□□□ -2.36
NUP98P52948 AL158032.1-201ENST00000605401 106 ntBASIC0.32□□□□□ -2.36
NUP98P52948 AC012409.4-201ENST00000612923 249 ntBASIC0.32□□□□□ -2.36
NUP98P52948 MTND4P16-201ENST00000466108 1367 ntBASIC0.32□□□□□ -2.36
NUP98P52948 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
NUP98P52948 Y_RNA.324-201ENST00000365165 102 ntBASIC0.31□□□□□ -2.36
NUP98P52948 SNORA4.2-201ENST00000365313 147 ntBASIC0.31□□□□□ -2.36
NUP98P52948 RNU6-25P-201ENST00000383873 107 ntBASIC0.31□□□□□ -2.36
NUP98P52948 RNU6-48P-201ENST00000384161 107 ntBASIC0.31□□□□□ -2.36
NUP98P52948 RNU6-15P-201ENST00000384534 107 ntBASIC0.31□□□□□ -2.36
NUP98P52948 RNU6-29P-201ENST00000384637 107 ntBASIC0.31□□□□□ -2.36
NUP98P52948 MIR578-201ENST00000384828 96 ntBASIC0.31□□□□□ -2.36
NUP98P52948 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.31□□□□□ -2.36
NUP98P52948 AL117351.1-201ENST00000438864 766 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AL606662.1-201ENST00000445763 553 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AC104982.1-201ENST00000478775 574 ntBASIC0.31□□□□□ -2.36
NUP98P52948 MTND3P25-201ENST00000509243 135 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AP002453.2-201ENST00000533503 320 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AC021231.3-201ENST00000558497 370 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AC025627.3-201ENST00000582078 182 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AC110760.3-201ENST00000598794 467 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AP002782.1-201ENST00000623107 614 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AC134026.1-201ENST00000623249 2239 ntBASIC0.31□□□□□ -2.36
NUP98P52948 RNU6-545P-201ENST00000362681 104 ntBASIC0.31□□□□□ -2.36
NUP98P52948 RNU6-562P-201ENST00000362731 107 ntBASIC0.31□□□□□ -2.36
NUP98P52948 RNU4-48P-201ENST00000365559 182 ntBASIC0.31□□□□□ -2.36
NUP98P52948 SNORA32.2-201ENST00000384049 122 ntBASIC0.31□□□□□ -2.36
NUP98P52948 RNU6-413P-201ENST00000384115 107 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
NUP98P52948 AC010154.1-201ENST00000425857 269 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AL356583.2-201ENST00000426536 280 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.31□□□□□ -2.36
NUP98P52948 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.31□□□□□ -2.36
NUP98P52948 RPL39P39-201ENST00000455840 151 ntBASIC0.31□□□□□ -2.36
NUP98P52948 SNRPGP7-201ENST00000469016 106 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.31□□□□□ -2.36
NUP98P52948 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.31□□□□□ -2.36
NUP98P52948 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.31□□□□□ -2.36
NUP98P52948 MIR4636-201ENST00000582271 80 ntBASIC0.31□□□□□ -2.36
NUP98P52948 AL929325.1-201ENST00000603096 117 ntBASIC0.31□□□□□ -2.36
NUP98P52948 CTHRC1P1-201ENST00000605383 469 ntBASIC0.31□□□□□ -2.36
NUP98P52948 MTND4P14-201ENST00000435799 1354 ntBASIC0.3□□□□□ -2.36
NUP98P52948 AC023934.1-201ENST00000574529 2389 ntBASIC0.3□□□□□ -2.36
NUP98P52948 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
NUP98P52948 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.3□□□□□ -2.36
NUP98P52948 snoU2-30.2-201ENST00000362805 70 ntBASIC0.3□□□□□ -2.36
NUP98P52948 U3.9-201ENST00000363823 204 ntBASIC0.3□□□□□ -2.36
NUP98P52948 Y_RNA.192-201ENST00000363977 102 ntBASIC0.3□□□□□ -2.36
NUP98P52948 RNU6-1026P-201ENST00000384465 108 ntBASIC0.3□□□□□ -2.36
NUP98P52948 Y_RNA.518-201ENST00000384552 113 ntBASIC0.3□□□□□ -2.36
NUP98P52948 RNU6-417P-201ENST00000384712 107 ntBASIC0.3□□□□□ -2.36
NUP98P52948 MIR1912-201ENST00000410389 80 ntBASIC0.3□□□□□ -2.36
NUP98P52948 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.3□□□□□ -2.36
NUP98P52948 FABP5P4-201ENST00000437203 171 ntBASIC0.3□□□□□ -2.36
NUP98P52948 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.3□□□□□ -2.36
NUP98P52948 MTCYBP1-201ENST00000454315 1119 ntBASIC0.3□□□□□ -2.36
NUP98P52948 RNU7-34P-201ENST00000459394 64 ntBASIC0.3□□□□□ -2.36
NUP98P52948 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.3□□□□□ -2.36
NUP98P52948 RNA5SP285-201ENST00000516619 119 ntBASIC0.3□□□□□ -2.36
NUP98P52948 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.3□□□□□ -2.36
NUP98P52948 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.3□□□□□ -2.36
NUP98P52948 MIR3118-1-201ENST00000581787 76 ntBASIC0.3□□□□□ -2.36
NUP98P52948 AL031281.1-201ENST00000604049 488 ntBASIC0.3□□□□□ -2.36
NUP98P52948 AP002360.4-201ENST00000606980 481 ntBASIC0.3□□□□□ -2.36
NUP98P52948 AC005520.5-201ENST00000613926 164 ntBASIC0.3□□□□□ -2.36
NUP98P52948 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.3□□□□□ -2.36
NUP98P52948 AC099786.3-201ENST00000565735 1410 ntBASIC0.29□□□□□ -2.36
NUP98P52948 Y_RNA.465-201ENST00000384293 102 ntBASIC0.29□□□□□ -2.36
NUP98P52948 MIR653-201ENST00000385279 96 ntBASIC0.29□□□□□ -2.36
NUP98P52948 RNU6-607P-201ENST00000411283 108 ntBASIC0.29□□□□□ -2.36
NUP98P52948 HMGN1P10-201ENST00000474557 553 ntBASIC0.29□□□□□ -2.36
NUP98P52948 RNU6-856P-201ENST00000516959 98 ntBASIC0.29□□□□□ -2.36
NUP98P52948 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.29□□□□□ -2.36
NUP98P52948 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.29□□□□□ -2.36
NUP98P52948 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.29□□□□□ -2.36
NUP98P52948 MIR5589-201ENST00000579442 60 ntBASIC0.29□□□□□ -2.36
NUP98P52948 AL360219.1-201ENST00000610230 366 ntBASIC0.29□□□□□ -2.36
NUP98P52948 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.29□□□□□ -2.36
NUP98P52948 Y_RNA.390-201ENST00000383932 102 ntBASIC0.29□□□□□ -2.36
NUP98P52948 RNU6-769P-201ENST00000384407 104 ntBASIC0.29□□□□□ -2.36
NUP98P52948 RNU6-505P-201ENST00000384427 107 ntBASIC0.29□□□□□ -2.36
NUP98P52948 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.29□□□□□ -2.36
NUP98P52948 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.29□□□□□ -2.36
NUP98P52948 AC098869.1-201ENST00000481627 292 ntBASIC0.29□□□□□ -2.36
NUP98P52948 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.29□□□□□ -2.36
NUP98P52948 RNU6-567P-201ENST00000516746 107 ntBASIC0.29□□□□□ -2.36
NUP98P52948 AC024995.1-201ENST00000523014 93 ntBASIC0.29□□□□□ -2.36
NUP98P52948 AC013828.2-201ENST00000532487 235 ntBASIC0.29□□□□□ -2.36
NUP98P52948 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.29□□□□□ -2.36
NUP98P52948 TPRKBP2-201ENST00000565969 475 ntBASIC0.29□□□□□ -2.36
NUP98P52948 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.29□□□□□ -2.36
NUP98P52948 AC091965.4-201ENST00000607691 587 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms