Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CYP4A27P-201ENST00000567218 190 ntBASIC2.16□□□□□ -2.06
PDX1P52945 AL355375.2-201ENST00000574825 175 ntBASIC2.16□□□□□ -2.06
PDX1P52945 AC113139.1-201ENST00000605049 239 ntBASIC2.16□□□□□ -2.06
PDX1P52945 AL669831.3-213ENST00000636676 183 ntBASIC2.16□□□□□ -2.06
PDX1P52945 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PDX1P52945 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PDX1P52945 SNORD32B-201ENST00000364460 84 ntBASIC2.15□□□□□ -2.07
PDX1P52945 RNU5E-4P-201ENST00000364931 120 ntBASIC2.15□□□□□ -2.07
PDX1P52945 RNU6-867P-201ENST00000364956 107 ntBASIC2.15□□□□□ -2.07
PDX1P52945 RNA5SP240-201ENST00000365355 128 ntBASIC2.15□□□□□ -2.07
PDX1P52945 Y_RNA.356-201ENST00000365475 113 ntBASIC2.15□□□□□ -2.07
PDX1P52945 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PDX1P52945 RNU6-482P-201ENST00000391068 107 ntBASIC2.15□□□□□ -2.07
PDX1P52945 MIR208B-201ENST00000401172 77 ntBASIC2.15□□□□□ -2.07
PDX1P52945 AL023284.1-201ENST00000403956 276 ntBASIC2.15□□□□□ -2.07
PDX1P52945 RNA5SP494-201ENST00000410653 129 ntBASIC2.15□□□□□ -2.07
PDX1P52945 RNU2-48P-201ENST00000410694 191 ntBASIC2.15□□□□□ -2.07
PDX1P52945 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.15□□□□□ -2.07
PDX1P52945 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.15□□□□□ -2.07
PDX1P52945 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.15□□□□□ -2.07
PDX1P52945 SNRPEP8-201ENST00000442866 260 ntBASIC2.15□□□□□ -2.07
PDX1P52945 AC093019.1-201ENST00000443135 252 ntBASIC2.15□□□□□ -2.07
PDX1P52945 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.15□□□□□ -2.07
PDX1P52945 AC087477.1-201ENST00000465747 340 ntBASIC2.15□□□□□ -2.07
PDX1P52945 RPL23AP75-201ENST00000491601 451 ntBASIC2.15□□□□□ -2.07
PDX1P52945 FGF7P4-201ENST00000509595 295 ntBASIC2.15□□□□□ -2.07
PDX1P52945 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.15□□□□□ -2.07
PDX1P52945 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.15□□□□□ -2.07
PDX1P52945 RNU6-559P-201ENST00000516151 98 ntBASIC2.15□□□□□ -2.07
PDX1P52945 FRG2DP-202ENST00000566967 323 ntBASIC2.15□□□□□ -2.07
PDX1P52945 MIR5696-201ENST00000578474 85 ntBASIC2.15□□□□□ -2.07
PDX1P52945 AC010928.2-201ENST00000588017 287 ntBASIC2.15□□□□□ -2.07
PDX1P52945 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.15□□□□□ -2.07
PDX1P52945 LARP7P1-201ENST00000605576 316 ntBASIC2.15□□□□□ -2.07
PDX1P52945 PCGEM1.1-201ENST00000613431 131 ntBASIC2.15□□□□□ -2.07
PDX1P52945 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
PDX1P52945 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.15□□□□□ -2.07
PDX1P52945 SCARNA4-201ENST00000629045 128 ntBASIC2.15□□□□□ -2.07
PDX1P52945 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.15□□□□□ -2.07
PDX1P52945 AC092881.1-201ENST00000638218 2733 ntBASIC2.15□□□□□ -2.07
PDX1P52945 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PDX1P52945 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PDX1P52945 RNU6-1188P-201ENST00000363795 107 ntBASIC2.14□□□□□ -2.07
PDX1P52945 RNA5SP99-201ENST00000364020 114 ntBASIC2.14□□□□□ -2.07
PDX1P52945 RNU4-56P-201ENST00000364700 142 ntBASIC2.14□□□□□ -2.07
PDX1P52945 SNORD116-29-201ENST00000384516 83 ntBASIC2.14□□□□□ -2.07
PDX1P52945 RNU6-331P-201ENST00000384724 107 ntBASIC2.14□□□□□ -2.07
PDX1P52945 MIR549A-201ENST00000385268 96 ntBASIC2.14□□□□□ -2.07
PDX1P52945 SNORA75.4-201ENST00000391278 119 ntBASIC2.14□□□□□ -2.07
PDX1P52945 Y_RNA.604-201ENST00000410574 102 ntBASIC2.14□□□□□ -2.07
PDX1P52945 RNU2-32P-201ENST00000411193 191 ntBASIC2.14□□□□□ -2.07
PDX1P52945 MIR449C-201ENST00000516047 92 ntBASIC2.14□□□□□ -2.07
PDX1P52945 AC018630.3-201ENST00000542637 96 ntBASIC2.14□□□□□ -2.07
PDX1P52945 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.14□□□□□ -2.07
PDX1P52945 MIR3923-201ENST00000579521 83 ntBASIC2.14□□□□□ -2.07
PDX1P52945 AC005014.2-201ENST00000607795 599 ntBASIC2.14□□□□□ -2.07
PDX1P52945 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.14□□□□□ -2.07
PDX1P52945 AC025253.1-201ENST00000613623 543 ntBASIC2.14□□□□□ -2.07
PDX1P52945 U4atac.1-201ENST00000618345 95 ntBASIC2.14□□□□□ -2.07
PDX1P52945 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PDX1P52945 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PDX1P52945 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PDX1P52945 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.13□□□□□ -2.07
PDX1P52945 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.13□□□□□ -2.07
PDX1P52945 Y_RNA.2-201ENST00000362330 96 ntBASIC2.13□□□□□ -2.07
PDX1P52945 SNORA25B-201ENST00000365507 128 ntBASIC2.13□□□□□ -2.07
PDX1P52945 SNORA67.3-201ENST00000384366 140 ntBASIC2.13□□□□□ -2.07
PDX1P52945 RNU1-148P-201ENST00000384472 162 ntBASIC2.13□□□□□ -2.07
PDX1P52945 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PDX1P52945 AL590556.1-201ENST00000423231 483 ntBASIC2.13□□□□□ -2.07
PDX1P52945 MTCO3P29-201ENST00000432119 779 ntBASIC2.13□□□□□ -2.07
PDX1P52945 RPL30P10-201ENST00000488148 337 ntBASIC2.13□□□□□ -2.07
PDX1P52945 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.13□□□□□ -2.07
PDX1P52945 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.13□□□□□ -2.07
PDX1P52945 SCARNA16.2-201ENST00000516520 172 ntBASIC2.13□□□□□ -2.07
PDX1P52945 RNA5SP82-201ENST00000516707 92 ntBASIC2.13□□□□□ -2.07
PDX1P52945 RNU6-567P-201ENST00000516746 107 ntBASIC2.13□□□□□ -2.07
PDX1P52945 HSPE1P18-201ENST00000517602 280 ntBASIC2.13□□□□□ -2.07
PDX1P52945 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.13□□□□□ -2.07
PDX1P52945 DEFB131C-201ENST00000528817 165 ntBASIC2.13□□□□□ -2.07
PDX1P52945 RAB11AP2-201ENST00000545905 639 ntBASIC2.13□□□□□ -2.07
PDX1P52945 PRELID2P1-201ENST00000552837 301 ntBASIC2.13□□□□□ -2.07
PDX1P52945 MIR4273-201ENST00000582824 84 ntBASIC2.13□□□□□ -2.07
PDX1P52945 AC005520.5-201ENST00000613926 164 ntBASIC2.13□□□□□ -2.07
PDX1P52945 AL449363.1-201ENST00000617815 186 ntBASIC2.13□□□□□ -2.07
PDX1P52945 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.13□□□□□ -2.07
PDX1P52945 MTND4LP32-201ENST00000636111 270 ntBASIC2.13□□□□□ -2.07
PDX1P52945 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.13□□□□□ -2.07
PDX1P52945 ZNF299P-201ENST00000406845 1804 ntBASIC2.12□□□□□ -2.07
PDX1P52945 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PDX1P52945 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
PDX1P52945 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.12□□□□□ -2.07
PDX1P52945 U8.10-201ENST00000384260 133 ntBASIC2.12□□□□□ -2.07
PDX1P52945 RNU6-310P-201ENST00000384655 107 ntBASIC2.12□□□□□ -2.07
PDX1P52945 Y_RNA.646-201ENST00000410980 101 ntBASIC2.12□□□□□ -2.07
PDX1P52945 RNU2-41P-201ENST00000410991 178 ntBASIC2.12□□□□□ -2.07
PDX1P52945 USMG5P1-201ENST00000425964 177 ntBASIC2.12□□□□□ -2.07
PDX1P52945 AL353997.1-201ENST00000432936 108 ntBASIC2.12□□□□□ -2.07
PDX1P52945 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.12□□□□□ -2.07
PDX1P52945 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms