Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LRRC6P1-201ENST00000532188 885 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 AC123904.2-201ENST00000548059 300 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 MIR5697-201ENST00000578045 78 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 AC011195.1-201ENST00000578177 177 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 AL357312.1-201ENST00000603879 298 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 AL356157.2-201ENST00000605122 111 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 AC072039.2-201ENST00000608883 439 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.04□□□□□ -2.4
GTF2A1P52655 AL450472.1-202ENST00000637286 180 ntBASIC0.04□□□□□ -2.4
GTF2A1P52655 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.04□□□□□ -2.4
GTF2A1P52655 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
GTF2A1P52655 RNU6-199P-201ENST00000362954 107 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 U3.4-201ENST00000363352 213 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 MIR300-201ENST00000401138 83 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 RNU2-70P-201ENST00000410718 179 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.03□□□□□ -2.4
GTF2A1P52655 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.03□□□□□ -2.4
GTF2A1P52655 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.03□□□□□ -2.4
GTF2A1P52655 AC112206.4-201ENST00000515142 405 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 MTND4LP26-201ENST00000518144 282 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 DEFB131C-201ENST00000528817 165 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 AP002001.1-203ENST00000534002 267 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.03□□□□□ -2.4
GTF2A1P52655 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.03□□□□□ -2.4
GTF2A1P52655 AC009712.1-201ENST00000564938 316 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 MIR4778-201ENST00000577635 80 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 AP002360.4-201ENST00000606980 481 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 AC012467.1-201ENST00000607740 256 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 AL391903.3-201ENST00000612158 163 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 AC073349.3-201ENST00000617616 186 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 MIR6734-201ENST00000621166 68 ntBASIC0.03□□□□□ -2.4
GTF2A1P52655 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
GTF2A1P52655 RNY4P16-201ENST00000364768 94 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 RNU6-1067P-201ENST00000384752 107 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 RNA5SP323-201ENST00000391094 133 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.02□□□□□ -2.41
GTF2A1P52655 RPL23AP50-201ENST00000434149 455 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 MTND4P15-201ENST00000437913 1033 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.02□□□□□ -2.41
GTF2A1P52655 AC016717.1-201ENST00000448918 286 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.02□□□□□ -2.41
GTF2A1P52655 Y_RNA.638-201ENST00000459374 113 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 MTND3P25-201ENST00000509243 135 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.02□□□□□ -2.41
GTF2A1P52655 RNU6-1146P-201ENST00000516282 102 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 RNU6-1110P-201ENST00000516462 101 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 AC107934.1-201ENST00000522215 217 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 AC013828.2-201ENST00000532487 235 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 AC068587.4-201ENST00000533893 186 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.02□□□□□ -2.41
GTF2A1P52655 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.02□□□□□ -2.41
GTF2A1P52655 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.02□□□□□ -2.41
GTF2A1P52655 AC131055.1-201ENST00000584626 316 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 AC073539.2-201ENST00000597113 165 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 AC100812.1-201ENST00000607622 580 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 AC104458.1-201ENST00000608243 463 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.02□□□□□ -2.41
GTF2A1P52655 AC005520.5-201ENST00000613926 164 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 AP000484.1-201ENST00000620067 1252 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 MIR924-201ENST00000638017 53 ntBASIC0.02□□□□□ -2.41
GTF2A1P52655 RNU6-37P-201ENST00000362692 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-552P-201ENST00000362869 119 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-11P-201ENST00000364234 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-1-201ENST00000383898 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-42P-201ENST00000384165 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-36P-201ENST00000384172 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-4P-201ENST00000384205 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-5P-201ENST00000384238 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-3P-201ENST00000384314 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-45P-201ENST00000384471 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-2-201ENST00000384627 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-9-201ENST00000384776 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-33P-201ENST00000384793 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 MIR140-201ENST00000385282 100 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNA5SP511-201ENST00000410487 115 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.01□□□□□ -2.41
GTF2A1P52655 AL133396.1-201ENST00000432048 687 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-1069P-201ENST00000516612 133 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 SUB1P2-201ENST00000556401 297 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.01□□□□□ -2.41
GTF2A1P52655 Z99289.3-201ENST00000605586 594 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-6P-201ENST00000606623 107 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 RNU6-88P-201ENST00000606801 100 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 AL139286.2-201ENST00000606838 396 ntBASIC0.01□□□□□ -2.41
GTF2A1P52655 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.01□□□□□ -2.41
GTF2A1P52655 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.01□□□□□ -2.41
GTF2A1P52655 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
GTF2A1P52655 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
GTF2A1P52655 MIR103A1-201ENST00000362165 78 ntBASIC0□□□□□ -2.41
GTF2A1P52655 RNU6-562P-201ENST00000362731 107 ntBASIC0□□□□□ -2.41
GTF2A1P52655 RNU6-336P-201ENST00000364891 107 ntBASIC0□□□□□ -2.41
GTF2A1P52655 RNU6-440P-201ENST00000390882 105 ntBASIC0□□□□□ -2.41
GTF2A1P52655 MTND3P20-201ENST00000407663 186 ntBASIC0□□□□□ -2.41
GTF2A1P52655 RNU6-607P-201ENST00000411283 108 ntBASIC0□□□□□ -2.41
GTF2A1P52655 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0□□□□□ -2.41
GTF2A1P52655 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0□□□□□ -2.41
GTF2A1P52655 AL445305.1-201ENST00000432577 575 ntBASIC0□□□□□ -2.41
GTF2A1P52655 AC000111.3-201ENST00000433478 193 ntBASIC0□□□□□ -2.41
GTF2A1P52655 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms