Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNU6-1042P-201ENST00000384204 107 ntBASIC1.46□□□□□ -2.18
CASP4P49662 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CASP4P49662 EBAG9P1-201ENST00000418955 543 ntBASIC1.46□□□□□ -2.18
CASP4P49662 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.46□□□□□ -2.18
CASP4P49662 AC021146.2-201ENST00000504736 556 ntBASIC1.46□□□□□ -2.18
CASP4P49662 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.46□□□□□ -2.18
CASP4P49662 HMGN1P13-201ENST00000505795 138 ntBASIC1.46□□□□□ -2.18
CASP4P49662 RNA5SP401-201ENST00000515920 127 ntBASIC1.46□□□□□ -2.18
CASP4P49662 RNU6-1069P-201ENST00000516612 133 ntBASIC1.46□□□□□ -2.18
CASP4P49662 AP005597.4-201ENST00000526762 229 ntBASIC1.46□□□□□ -2.18
CASP4P49662 AC104383.1-201ENST00000530297 370 ntBASIC1.46□□□□□ -2.18
CASP4P49662 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.46□□□□□ -2.18
CASP4P49662 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.46□□□□□ -2.18
CASP4P49662 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
CASP4P49662 MIR5094-201ENST00000578766 85 ntBASIC1.46□□□□□ -2.18
CASP4P49662 MIR3611-201ENST00000584484 83 ntBASIC1.46□□□□□ -2.18
CASP4P49662 AC092747.3-201ENST00000603769 301 ntBASIC1.46□□□□□ -2.18
CASP4P49662 AC016925.2-201ENST00000605108 242 ntBASIC1.46□□□□□ -2.18
CASP4P49662 AL512598.1-201ENST00000610158 273 ntBASIC1.46□□□□□ -2.18
CASP4P49662 AC022513.1-201ENST00000624512 117 ntBASIC1.46□□□□□ -2.18
CASP4P49662 AL359697.1-201ENST00000624879 587 ntBASIC1.46□□□□□ -2.18
CASP4P49662 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.46□□□□□ -2.18
CASP4P49662 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.46□□□□□ -2.18
CASP4P49662 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.45□□□□□ -2.18
CASP4P49662 RNU6-227P-201ENST00000362865 103 ntBASIC1.45□□□□□ -2.18
CASP4P49662 RNU6-112P-201ENST00000363599 104 ntBASIC1.45□□□□□ -2.18
CASP4P49662 RNU6-414P-201ENST00000363705 104 ntBASIC1.45□□□□□ -2.18
CASP4P49662 Y_RNA.481-201ENST00000384373 102 ntBASIC1.45□□□□□ -2.18
CASP4P49662 AP1B1P2-201ENST00000416196 106 ntBASIC1.45□□□□□ -2.18
CASP4P49662 MTCO1P21-201ENST00000416634 589 ntBASIC1.45□□□□□ -2.18
CASP4P49662 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.45□□□□□ -2.18
CASP4P49662 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.45□□□□□ -2.18
CASP4P49662 MTCO1P44-201ENST00000441935 243 ntBASIC1.45□□□□□ -2.18
CASP4P49662 RNU1-123P-201ENST00000458950 160 ntBASIC1.45□□□□□ -2.18
CASP4P49662 U8.21-201ENST00000459536 136 ntBASIC1.45□□□□□ -2.18
CASP4P49662 AC004223.1-201ENST00000479840 271 ntBASIC1.45□□□□□ -2.18
CASP4P49662 Y_RNA.654-201ENST00000497848 106 ntBASIC1.45□□□□□ -2.18
CASP4P49662 AC114801.2-201ENST00000503825 781 ntBASIC1.45□□□□□ -2.18
CASP4P49662 AC091885.1-201ENST00000506658 268 ntBASIC1.45□□□□□ -2.18
CASP4P49662 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.45□□□□□ -2.18
CASP4P49662 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.45□□□□□ -2.18
CASP4P49662 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.45□□□□□ -2.18
CASP4P49662 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.45□□□□□ -2.18
CASP4P49662 AC069114.2-201ENST00000604699 304 ntBASIC1.45□□□□□ -2.18
CASP4P49662 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.45□□□□□ -2.18
CASP4P49662 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.45□□□□□ -2.18
CASP4P49662 AC073534.2-201ENST00000620377 381 ntBASIC1.45□□□□□ -2.18
CASP4P49662 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.45□□□□□ -2.18
CASP4P49662 RNU6-203P-201ENST00000384038 104 ntBASIC1.44□□□□□ -2.18
CASP4P49662 RNU6-38P-201ENST00000384085 107 ntBASIC1.44□□□□□ -2.18
CASP4P49662 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
CASP4P49662 RPL21P111-201ENST00000418453 477 ntBASIC1.44□□□□□ -2.18
CASP4P49662 ARL5AP1-201ENST00000418991 388 ntBASIC1.44□□□□□ -2.18
CASP4P49662 AL357134.1-201ENST00000445848 426 ntBASIC1.44□□□□□ -2.18
CASP4P49662 ATP5J2P3-201ENST00000451550 258 ntBASIC1.44□□□□□ -2.18
CASP4P49662 RNU6-323P-201ENST00000521915 107 ntBASIC1.44□□□□□ -2.18
CASP4P49662 MIR3124-201ENST00000582636 67 ntBASIC1.44□□□□□ -2.18
CASP4P49662 AC245008.1-201ENST00000608123 476 ntBASIC1.44□□□□□ -2.18
CASP4P49662 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
CASP4P49662 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.44□□□□□ -2.18
CASP4P49662 AC022079.1-201ENST00000621546 602 ntBASIC1.44□□□□□ -2.18
CASP4P49662 AC097520.1-201ENST00000624435 385 ntBASIC1.44□□□□□ -2.18
CASP4P49662 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CASP4P49662 AL159152.1-201ENST00000635019 2587 ntBASIC1.44□□□□□ -2.18
CASP4P49662 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
CASP4P49662 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CASP4P49662 Y_RNA.132-201ENST00000363421 102 ntBASIC1.43□□□□□ -2.18
CASP4P49662 RNU4-66P-201ENST00000365199 138 ntBASIC1.43□□□□□ -2.18
CASP4P49662 SNORA69-201ENST00000383895 132 ntBASIC1.43□□□□□ -2.18
CASP4P49662 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
CASP4P49662 SNORA12.2-201ENST00000391040 156 ntBASIC1.43□□□□□ -2.18
CASP4P49662 RNU6-1093P-201ENST00000391194 107 ntBASIC1.43□□□□□ -2.18
CASP4P49662 MIR300-201ENST00000401138 83 ntBASIC1.43□□□□□ -2.18
CASP4P49662 FTH1P12-201ENST00000432137 551 ntBASIC1.43□□□□□ -2.18
CASP4P49662 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CASP4P49662 snoU13.9-201ENST00000458927 103 ntBASIC1.43□□□□□ -2.18
CASP4P49662 RPS29P27-201ENST00000463711 170 ntBASIC1.43□□□□□ -2.18
CASP4P49662 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.43□□□□□ -2.18
CASP4P49662 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.43□□□□□ -2.18
CASP4P49662 RPL39P5-202ENST00000512505 151 ntBASIC1.43□□□□□ -2.18
CASP4P49662 AC025465.4-201ENST00000513422 638 ntBASIC1.43□□□□□ -2.18
CASP4P49662 RNU6-405P-201ENST00000516637 110 ntBASIC1.43□□□□□ -2.18
CASP4P49662 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.43□□□□□ -2.18
CASP4P49662 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.43□□□□□ -2.18
CASP4P49662 AL118558.2-201ENST00000556294 238 ntBASIC1.43□□□□□ -2.18
CASP4P49662 AC026470.2-201ENST00000561492 181 ntBASIC1.43□□□□□ -2.18
CASP4P49662 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.43□□□□□ -2.18
CASP4P49662 MIR4422-201ENST00000581938 83 ntBASIC1.43□□□□□ -2.18
CASP4P49662 AC010620.1-201ENST00000601088 1102 ntBASIC1.43□□□□□ -2.18
CASP4P49662 AL357078.3-201ENST00000607528 618 ntBASIC1.43□□□□□ -2.18
CASP4P49662 AC083806.3-201ENST00000614016 455 ntBASIC1.43□□□□□ -2.18
CASP4P49662 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.43□□□□□ -2.18
CASP4P49662 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.43□□□□□ -2.18
CASP4P49662 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.43□□□□□ -2.18
CASP4P49662 MTND5P26-201ENST00000426018 1752 ntBASIC1.42□□□□□ -2.18
CASP4P49662 MIR378A-201ENST00000362177 66 ntBASIC1.42□□□□□ -2.18
CASP4P49662 RNU1-62P-201ENST00000362599 164 ntBASIC1.42□□□□□ -2.18
CASP4P49662 RNU6-562P-201ENST00000362731 107 ntBASIC1.42□□□□□ -2.18
CASP4P49662 Y_RNA.378-201ENST00000365652 113 ntBASIC1.42□□□□□ -2.18
CASP4P49662 RNU6-1329P-201ENST00000365664 107 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms