Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNA5SP494-201ENST00000410653 129 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 RNU2-32P-201ENST00000411193 191 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 AL139132.1-201ENST00000431587 344 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.08□□□□□ -2.08
NKX2-1P43699 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.08□□□□□ -2.08
NKX2-1P43699 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.08□□□□□ -2.08
NKX2-1P43699 Y_RNA.631-201ENST00000459607 101 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 RPS29P26-201ENST00000477483 171 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 AC145146.1-201ENST00000496370 254 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 RNA5SP282-201ENST00000516355 108 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.08□□□□□ -2.08
NKX2-1P43699 AC020661.2-201ENST00000560114 134 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.08□□□□□ -2.08
NKX2-1P43699 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.08□□□□□ -2.08
NKX2-1P43699 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 AL132822.1-201ENST00000617063 513 ntBASIC2.08□□□□□ -2.08
NKX2-1P43699 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
NKX2-1P43699 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.07□□□□□ -2.08
NKX2-1P43699 RNU5F-3P-201ENST00000363767 117 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 RNU6-944P-201ENST00000364023 107 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 RNU6-245P-201ENST00000384020 107 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 SNORA9-201ENST00000384215 133 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 RNU6-474P-201ENST00000384243 107 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 SNORA40.19-201ENST00000390846 128 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 SNORA46.1-201ENST00000391069 153 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 RNU1-139P-201ENST00000391307 165 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 MIR1294-201ENST00000408503 142 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 RNU6-1156P-201ENST00000410365 100 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 RNU2-48P-201ENST00000410694 191 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 AC007098.1-201ENST00000420122 367 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX2-1P43699 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX2-1P43699 AL035666.1-201ENST00000446195 348 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 AL139109.1-201ENST00000455491 297 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX2-1P43699 RNA5SP137-201ENST00000516833 135 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 RNU7-4P-201ENST00000516961 62 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX2-1P43699 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX2-1P43699 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NKX2-1P43699 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
NKX2-1P43699 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NKX2-1P43699 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.07□□□□□ -2.08
NKX2-1P43699 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX2-1P43699 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX2-1P43699 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX2-1P43699 Y_RNA.364-201ENST00000365532 101 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 Y_RNA.405-201ENST00000383979 100 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 Y_RNA.428-201ENST00000384078 102 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 Y_RNA.451-201ENST00000384200 100 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 SNORA36A-201ENST00000384221 132 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 Y_RNA.524-201ENST00000384564 100 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 RNU6-1011P-201ENST00000384668 107 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 Y_RNA.561-201ENST00000384694 100 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 MIR491-201ENST00000384877 84 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NKX2-1P43699 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX2-1P43699 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX2-1P43699 Z82188.1-201ENST00000436709 154 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 AC007677.1-201ENST00000445757 515 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.06□□□□□ -2.08
NKX2-1P43699 SNORA31.11-201ENST00000516528 139 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 RNU6-699P-201ENST00000517081 110 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 RNU6-58P-201ENST00000517143 103 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 AC144568.1-201ENST00000520139 137 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 AC027288.2-201ENST00000553028 243 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 AC026470.2-201ENST00000561492 181 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 AC026271.5-201ENST00000577873 130 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 AC245884.12-201ENST00000615364 59 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 AC087588.2-201ENST00000617667 426 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 AL138825.1-201ENST00000618587 192 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 AC138305.3-201ENST00000624988 240 ntBASIC2.06□□□□□ -2.08
NKX2-1P43699 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
NKX2-1P43699 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NKX2-1P43699 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NKX2-1P43699 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NKX2-1P43699 Y_RNA.28-201ENST00000362554 111 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 Y_RNA.48-201ENST00000362710 103 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 RNU1-112P-201ENST00000364401 164 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 AC117470.1-201ENST00000381974 330 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 Y_RNA.394-201ENST00000383942 103 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 RNU6-26P-201ENST00000383985 107 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 SNORA44-201ENST00000384584 132 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 MIR128-1-201ENST00000384921 82 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 MIR625-201ENST00000385047 85 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 MIR524-201ENST00000385242 87 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 RNU6-159P-201ENST00000391080 106 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 MIR548P-201ENST00000408336 84 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 RNU6-1304P-201ENST00000411374 106 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 PMCHL1-202ENST00000423102 261 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 MTCO2P12-201ENST00000427426 682 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 AC087499.2-201ENST00000432861 149 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 AL513328.1-201ENST00000446460 224 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.05□□□□□ -2.08
NKX2-1P43699 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.05□□□□□ -2.08
NKX2-1P43699 Y_RNA.711-201ENST00000516993 102 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 SNORD116.3-201ENST00000517176 78 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 AC004584.2-201ENST00000570407 410 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 MIR3126-201ENST00000577443 74 ntBASIC2.05□□□□□ -2.08
NKX2-1P43699 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms