Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 U3.9-201ENST00000363823 204 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 RNU6-694P-201ENST00000364071 147 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.51□□□□□ -2.01
PTPN9P43378 AC018865.2-201ENST00000423631 129 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.51□□□□□ -2.01
PTPN9P43378 MTND1P14-201ENST00000427400 950 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.51□□□□□ -2.01
PTPN9P43378 CBX3P6-201ENST00000430257 527 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 Z82188.1-201ENST00000436709 154 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 AL137792.2-201ENST00000443484 235 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.51□□□□□ -2.01
PTPN9P43378 AC145146.1-201ENST00000496370 254 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 Y_RNA.706-201ENST00000516933 99 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 RNA5SP54-201ENST00000516951 92 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 RNU7-4P-201ENST00000516961 62 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 SNORA48.11-201ENST00000517015 89 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 RNU6-586P-201ENST00000517265 104 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 RNU1-104P-201ENST00000517280 175 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 EIF4A1P12-201ENST00000551910 141 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 SNRPGP18-201ENST00000553000 214 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.51□□□□□ -2.01
PTPN9P43378 AC023824.2-201ENST00000566185 400 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PTPN9P43378 AL138963.2-201ENST00000605137 226 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 RPL17P51-201ENST00000605218 238 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 AC103810.6-201ENST00000606708 136 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 MIR6852-201ENST00000621699 66 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 CTSLP2-204ENST00000629029 392 ntBASIC2.51□□□□□ -2.01
PTPN9P43378 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTPN9P43378 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTPN9P43378 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTPN9P43378 snoU2_19.1-201ENST00000362361 80 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 SNORD32B-201ENST00000364460 84 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 RNU1-115P-201ENST00000365329 160 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 Y_RNA.405-201ENST00000383979 100 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 Y_RNA.451-201ENST00000384200 100 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 Y_RNA.524-201ENST00000384564 100 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 Y_RNA.561-201ENST00000384694 100 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 MIR625-201ENST00000385047 85 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 SNORA46.1-201ENST00000391069 153 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 MIR190B-201ENST00000401119 79 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PTPN9P43378 MIR1302-11-201ENST00000408051 138 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 MIR1302-9-201ENST00000408365 138 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 MIR1302-10-201ENST00000408734 138 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 RNA5SP181-201ENST00000410246 98 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 RNU2-63P-201ENST00000410792 194 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 AL354751.2-201ENST00000415471 210 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 AC009963.1-201ENST00000417265 157 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 AL161788.1-201ENST00000441805 169 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.5□□□□□ -2.01
PTPN9P43378 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
PTPN9P43378 MIR1302-2-201ENST00000607096 138 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 uc_338.22-201ENST00000622722 187 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 AC022140.2-201ENST00000623500 188 ntBASIC2.5□□□□□ -2.01
PTPN9P43378 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PTPN9P43378 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PTPN9P43378 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PTPN9P43378 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.49□□□□□ -2.01
PTPN9P43378 MIR21-201ENST00000362134 72 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 Y_RNA.5-201ENST00000362334 102 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 RNU6-99P-201ENST00000364721 107 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 RNU6-1227P-201ENST00000383981 107 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 Y_RNA.428-201ENST00000384078 102 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 MIR32-201ENST00000384965 70 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 MIR208B-201ENST00000401172 77 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 RNU6-1156P-201ENST00000410365 100 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 MTCO2P12-201ENST00000427426 682 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 MTCO3P29-201ENST00000432119 779 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.49□□□□□ -2.01
PTPN9P43378 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.49□□□□□ -2.01
PTPN9P43378 MIR2053-201ENST00000459295 91 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 Y_RNA.631-201ENST00000459607 101 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 AC026436.1-201ENST00000510537 270 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.49□□□□□ -2.01
PTPN9P43378 RNU6-699P-201ENST00000517081 110 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 AC023442.1-201ENST00000531247 422 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.49□□□□□ -2.01
PTPN9P43378 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.49□□□□□ -2.01
PTPN9P43378 MIR4672-201ENST00000583126 81 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 AC243829.7-201ENST00000633081 225 ntBASIC2.49□□□□□ -2.01
PTPN9P43378 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.49□□□□□ -2.01
PTPN9P43378 RNU5F-3P-201ENST00000363767 117 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 Y_RNA.364-201ENST00000365532 101 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 Y_RNA.394-201ENST00000383942 103 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 RNU6-378P-201ENST00000384324 107 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 Y_RNA.500-201ENST00000384466 111 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 RNU6-1274P-201ENST00000384557 107 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.48□□□□□ -2.01
PTPN9P43378 MTCYBP6-201ENST00000441810 138 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 AC007677.1-201ENST00000445757 515 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 snoU13.6-201ENST00000458785 104 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 AC132942.1-201ENST00000486753 483 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 AC234781.5-201ENST00000508429 271 ntBASIC2.48□□□□□ -2.01
PTPN9P43378 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms