Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC007969.2-201ENST00000441891 191 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.2□□□□□ -2.06
HNF4AP41235 RNU7-152P-201ENST00000458982 64 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 AC027575.1-201ENST00000481064 460 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 AC097473.1-201ENST00000508142 408 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 AC018630.3-201ENST00000542637 96 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 AL109918.3-201ENST00000603072 338 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 AC005034.5-201ENST00000604219 466 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.2□□□□□ -2.06
HNF4AP41235 AL627230.6-201ENST00000611129 280 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 AL159153.1-201ENST00000619688 317 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 AC241585.2-209ENST00000638217 143 ntBASIC2.2□□□□□ -2.06
HNF4AP41235 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HNF4AP41235 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HNF4AP41235 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HNF4AP41235 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HNF4AP41235 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 RNA5SP276-201ENST00000362580 94 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 Y_RNA.138-201ENST00000363462 102 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 Y_RNA.315-201ENST00000365117 102 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 Y_RNA.431-201ENST00000384086 102 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 MIR521-1-201ENST00000384902 87 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 RNU6-174P-201ENST00000410406 106 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 AC096920.1-201ENST00000423991 241 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.19□□□□□ -2.06
HNF4AP41235 AC007677.1-201ENST00000445757 515 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 RPL39P29-201ENST00000447779 157 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.19□□□□□ -2.06
HNF4AP41235 ELOCP24-201ENST00000456370 334 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 Y_RNA.653-201ENST00000459091 95 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 FO393415.2-201ENST00000480085 343 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 RPL30P1-201ENST00000488676 339 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.19□□□□□ -2.06
HNF4AP41235 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.19□□□□□ -2.06
HNF4AP41235 RNU6-120P-201ENST00000516077 103 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.19□□□□□ -2.06
HNF4AP41235 BNIP3P16-201ENST00000589779 534 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 VN1R107P-201ENST00000601784 209 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 PISRT1.1-201ENST00000616930 107 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.19□□□□□ -2.06
HNF4AP41235 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HNF4AP41235 Y_RNA.2-201ENST00000362330 96 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 Y_RNA.48-201ENST00000362710 103 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 Y_RNA.187-201ENST00000363918 113 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 RNU6-596P-201ENST00000365395 98 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 RNU6-933P-201ENST00000384424 107 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 SNORA67.4-201ENST00000384688 142 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 RNU2-48P-201ENST00000410694 191 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 AL158823.1-201ENST00000418441 478 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 AL590556.1-201ENST00000423231 483 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 AC018634.1-201ENST00000437554 401 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 DAP3P1-201ENST00000441522 278 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.18□□□□□ -2.06
HNF4AP41235 RPL23AP3-201ENST00000453844 468 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.18□□□□□ -2.06
HNF4AP41235 U8.21-201ENST00000459536 136 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 AC093303.1-201ENST00000514549 295 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 AC008749.1-201ENST00000597650 306 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 AP001836.1-201ENST00000604675 523 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 AC018889.1-201ENST00000605372 397 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 MIR8076-201ENST00000611401 83 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HNF4AP41235 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HNF4AP41235 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.18□□□□□ -2.06
HNF4AP41235 snoU2_19.1-201ENST00000362361 80 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 RNU6-227P-201ENST00000362865 103 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 SNORD50.1-201ENST00000362987 71 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 RNU6-944P-201ENST00000364023 107 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 SNORD42.2-201ENST00000365570 69 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 RNU6-890P-201ENST00000384121 107 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 MIR544A-201ENST00000384855 91 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 RNU4-53P-201ENST00000410828 140 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 RNU6-1245P-201ENST00000411130 106 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 RNA5SP508-201ENST00000411327 119 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.17□□□□□ -2.06
HNF4AP41235 AL354751.2-201ENST00000415471 210 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 AL353752.1-201ENST00000454946 260 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 PRELID3BP1-201ENST00000457142 540 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 SCARNA16.2-201ENST00000516520 172 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 AC109446.1-201ENST00000566172 220 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 MIR4719-201ENST00000585233 84 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 AC078795.3-201ENST00000602913 472 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 AC080078.3-201ENST00000605407 463 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 AL132822.1-201ENST00000617063 513 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 AC091932.3-201ENST00000624223 323 ntBASIC2.17□□□□□ -2.06
HNF4AP41235 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.16□□□□□ -2.06
HNF4AP41235 MIR369-201ENST00000362155 70 ntBASIC2.16□□□□□ -2.06
HNF4AP41235 SNORD115-3-201ENST00000363100 82 ntBASIC2.16□□□□□ -2.06
HNF4AP41235 Y_RNA.146-201ENST00000363549 102 ntBASIC2.16□□□□□ -2.06
HNF4AP41235 SNORD32A-201ENST00000364805 84 ntBASIC2.16□□□□□ -2.06
HNF4AP41235 RNU6-474P-201ENST00000384243 107 ntBASIC2.16□□□□□ -2.06
HNF4AP41235 RNU6-1222P-201ENST00000384615 107 ntBASIC2.16□□□□□ -2.06
HNF4AP41235 RNA5SP465-201ENST00000391195 109 ntBASIC2.16□□□□□ -2.06
HNF4AP41235 AP000275.1-201ENST00000411943 390 ntBASIC2.16□□□□□ -2.06
HNF4AP41235 AC243428.1-201ENST00000421099 264 ntBASIC2.16□□□□□ -2.06
HNF4AP41235 MTND2P29-201ENST00000438595 412 ntBASIC2.16□□□□□ -2.06
HNF4AP41235 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms