Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RFC1P35251 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.57□□□□□ -2
RFC1P35251 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RFC1P35251 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RFC1P35251 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
RFC1P35251 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.56□□□□□ -2
RFC1P35251 AC080100.1-201ENST00000624239 5356 ntBASIC2.56□□□□□ -2
RFC1P35251 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.56□□□□□ -2
RFC1P35251 RNY3P11-201ENST00000364153 102 ntBASIC2.56□□□□□ -2
RFC1P35251 RNU4-9P-201ENST00000364951 139 ntBASIC2.56□□□□□ -2
RFC1P35251 RNU6-142P-201ENST00000384019 107 ntBASIC2.56□□□□□ -2
RFC1P35251 RNU1-138P-201ENST00000384093 164 ntBASIC2.56□□□□□ -2
RFC1P35251 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.56□□□□□ -2
RFC1P35251 AL359511.1-201ENST00000402970 211 ntBASIC2.56□□□□□ -2
RFC1P35251 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
RFC1P35251 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.56□□□□□ -2
RFC1P35251 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.56□□□□□ -2
RFC1P35251 AL353752.1-201ENST00000454946 260 ntBASIC2.56□□□□□ -2
RFC1P35251 AL139109.1-201ENST00000455491 297 ntBASIC2.56□□□□□ -2
RFC1P35251 snoU13.6-201ENST00000458785 104 ntBASIC2.56□□□□□ -2
RFC1P35251 snoU13.30-201ENST00000458951 104 ntBASIC2.56□□□□□ -2
RFC1P35251 RN7SKP210-201ENST00000459176 261 ntBASIC2.56□□□□□ -2
RFC1P35251 AC087477.1-201ENST00000465747 340 ntBASIC2.56□□□□□ -2
RFC1P35251 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.56□□□□□ -2
RFC1P35251 AC021231.3-201ENST00000558497 370 ntBASIC2.56□□□□□ -2
RFC1P35251 AC004584.2-201ENST00000570407 410 ntBASIC2.56□□□□□ -2
RFC1P35251 Z98751.3-201ENST00000604447 521 ntBASIC2.56□□□□□ -2
RFC1P35251 Y_RNA.812-201ENST00000610788 101 ntBASIC2.56□□□□□ -2
RFC1P35251 Y_RNA.784-201ENST00000613803 101 ntBASIC2.56□□□□□ -2
RFC1P35251 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.56□□□□□ -2
RFC1P35251 Y_RNA.787-201ENST00000616522 101 ntBASIC2.56□□□□□ -2
RFC1P35251 Y_RNA.780-201ENST00000617336 101 ntBASIC2.56□□□□□ -2
RFC1P35251 Y_RNA.801-201ENST00000619005 101 ntBASIC2.56□□□□□ -2
RFC1P35251 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.56□□□□□ -2
RFC1P35251 AC138305.3-201ENST00000624988 240 ntBASIC2.56□□□□□ -2
RFC1P35251 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
RFC1P35251 Y_RNA.428-201ENST00000384078 102 ntBASIC2.55□□□□□ -2
RFC1P35251 U8.10-201ENST00000384260 133 ntBASIC2.55□□□□□ -2
RFC1P35251 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.55□□□□□ -2
RFC1P35251 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.55□□□□□ -2
RFC1P35251 Z82209.1-201ENST00000422141 2135 ntBASIC2.55□□□□□ -2
RFC1P35251 MTCYBP10-201ENST00000424905 650 ntBASIC2.55□□□□□ -2
RFC1P35251 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.55□□□□□ -2
RFC1P35251 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.55□□□□□ -2
RFC1P35251 AC073901.1-201ENST00000462471 408 ntBASIC2.55□□□□□ -2
RFC1P35251 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.55□□□□□ -2
RFC1P35251 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.55□□□□□ -2
RFC1P35251 RNU2-53P-201ENST00000516257 147 ntBASIC2.55□□□□□ -2
RFC1P35251 SNORD116.3-201ENST00000517176 78 ntBASIC2.55□□□□□ -2
RFC1P35251 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RFC1P35251 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.55□□□□□ -2
RFC1P35251 AC027176.1-201ENST00000560204 514 ntBASIC2.55□□□□□ -2
RFC1P35251 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.55□□□□□ -2
RFC1P35251 AC006023.1-201ENST00000603944 259 ntBASIC2.55□□□□□ -2
RFC1P35251 AL355802.3-201ENST00000607571 545 ntBASIC2.55□□□□□ -2
RFC1P35251 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
RFC1P35251 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFC1P35251 OR56A5-201ENST00000340110 738 ntBASIC2.54□□□□□ -2
RFC1P35251 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.54□□□□□ -2
RFC1P35251 MIR21-201ENST00000362134 72 ntBASIC2.54□□□□□ -2
RFC1P35251 RNU4-15P-201ENST00000362613 141 ntBASIC2.54□□□□□ -2
RFC1P35251 RNU6-655P-201ENST00000362858 107 ntBASIC2.54□□□□□ -2
RFC1P35251 Y_RNA.80-201ENST00000362996 102 ntBASIC2.54□□□□□ -2
RFC1P35251 SNORA63-201ENST00000363450 132 ntBASIC2.54□□□□□ -2
RFC1P35251 RNU6-1210P-201ENST00000363775 107 ntBASIC2.54□□□□□ -2
RFC1P35251 SNORD115-32-201ENST00000364079 82 ntBASIC2.54□□□□□ -2
RFC1P35251 RNU6-17P-201ENST00000384245 107 ntBASIC2.54□□□□□ -2
RFC1P35251 Y_RNA.485-201ENST00000384395 102 ntBASIC2.54□□□□□ -2
RFC1P35251 RNU6-18P-201ENST00000384527 107 ntBASIC2.54□□□□□ -2
RFC1P35251 MIR634-201ENST00000385208 97 ntBASIC2.54□□□□□ -2
RFC1P35251 MIR524-201ENST00000385242 87 ntBASIC2.54□□□□□ -2
RFC1P35251 CBX3P9-201ENST00000402326 552 ntBASIC2.54□□□□□ -2
RFC1P35251 AC009963.1-201ENST00000417265 157 ntBASIC2.54□□□□□ -2
RFC1P35251 AC012306.1-201ENST00000423267 114 ntBASIC2.54□□□□□ -2
RFC1P35251 AC092423.1-201ENST00000430165 186 ntBASIC2.54□□□□□ -2
RFC1P35251 AL160004.2-201ENST00000432935 350 ntBASIC2.54□□□□□ -2
RFC1P35251 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.54□□□□□ -2
RFC1P35251 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.54□□□□□ -2
RFC1P35251 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.54□□□□□ -2
RFC1P35251 AC099799.1-201ENST00000439809 192 ntBASIC2.54□□□□□ -2
RFC1P35251 TOMM22P6-201ENST00000465035 409 ntBASIC2.54□□□□□ -2
RFC1P35251 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.54□□□□□ -2
RFC1P35251 RNU4-77P-201ENST00000516692 156 ntBASIC2.54□□□□□ -2
RFC1P35251 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
RFC1P35251 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.54□□□□□ -2
RFC1P35251 AL442663.2-201ENST00000554385 511 ntBASIC2.54□□□□□ -2
RFC1P35251 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.54□□□□□ -2
RFC1P35251 MIR3136-201ENST00000583498 78 ntBASIC2.54□□□□□ -2
RFC1P35251 AC092447.9-201ENST00000603395 144 ntBASIC2.54□□□□□ -2
RFC1P35251 AL034555.1-201ENST00000604816 211 ntBASIC2.54□□□□□ -2
RFC1P35251 SNORD58B-201ENST00000607313 66 ntBASIC2.54□□□□□ -2
RFC1P35251 AC006157.1-201ENST00000611750 366 ntBASIC2.54□□□□□ -2
RFC1P35251 AC040896.1-201ENST00000613819 479 ntBASIC2.54□□□□□ -2
RFC1P35251 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2
RFC1P35251 RNU4-42P-201ENST00000364738 142 ntBASIC2.53□□□□□ -2
RFC1P35251 RNU1-115P-201ENST00000365329 160 ntBASIC2.53□□□□□ -2
RFC1P35251 SNORA33.2-201ENST00000365413 134 ntBASIC2.53□□□□□ -2
RFC1P35251 RNU6-1032P-201ENST00000384100 107 ntBASIC2.53□□□□□ -2
RFC1P35251 MIR32-201ENST00000384965 70 ntBASIC2.53□□□□□ -2
RFC1P35251 RNU6-700P-201ENST00000391043 107 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms