Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.84□□□□□ -2.27
RPA3P35244 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
RPA3P35244 OR4G1P-203ENST00000641984 1631 ntBASIC0.83□□□□□ -2.28
RPA3P35244 RNU6-1214P-201ENST00000363650 109 ntBASIC0.83□□□□□ -2.28
RPA3P35244 Y_RNA.480-201ENST00000384364 102 ntBASIC0.83□□□□□ -2.28
RPA3P35244 SNORA16.2-201ENST00000390991 127 ntBASIC0.83□□□□□ -2.28
RPA3P35244 RNU6-1093P-201ENST00000391194 107 ntBASIC0.83□□□□□ -2.28
RPA3P35244 MIR1276-201ENST00000408707 83 ntBASIC0.83□□□□□ -2.28
RPA3P35244 RNU4-46P-201ENST00000410818 138 ntBASIC0.83□□□□□ -2.28
RPA3P35244 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.83□□□□□ -2.28
RPA3P35244 GPR143P-201ENST00000434155 205 ntBASIC0.83□□□□□ -2.28
RPA3P35244 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.83□□□□□ -2.28
RPA3P35244 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.83□□□□□ -2.28
RPA3P35244 AC079781.2-201ENST00000446424 169 ntBASIC0.83□□□□□ -2.28
RPA3P35244 SUMO2P16-201ENST00000519475 264 ntBASIC0.83□□□□□ -2.28
RPA3P35244 CYCSP23-201ENST00000519781 313 ntBASIC0.83□□□□□ -2.28
RPA3P35244 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
RPA3P35244 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.83□□□□□ -2.28
RPA3P35244 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
RPA3P35244 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
RPA3P35244 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.83□□□□□ -2.28
RPA3P35244 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.83□□□□□ -2.28
RPA3P35244 SEPT14P19-203ENST00000633205 211 ntBASIC0.83□□□□□ -2.28
RPA3P35244 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RPA3P35244 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPA3P35244 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPA3P35244 RNU6-266P-201ENST00000364225 107 ntBASIC0.82□□□□□ -2.28
RPA3P35244 SNORA25.9-201ENST00000365087 128 ntBASIC0.82□□□□□ -2.28
RPA3P35244 RNU6-434P-201ENST00000384376 107 ntBASIC0.82□□□□□ -2.28
RPA3P35244 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
RPA3P35244 MIR1283-1-201ENST00000408494 87 ntBASIC0.82□□□□□ -2.28
RPA3P35244 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.82□□□□□ -2.28
RPA3P35244 RPS3AP3-201ENST00000411933 242 ntBASIC0.82□□□□□ -2.28
RPA3P35244 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.82□□□□□ -2.28
RPA3P35244 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
RPA3P35244 AC016717.1-201ENST00000448918 286 ntBASIC0.82□□□□□ -2.28
RPA3P35244 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.82□□□□□ -2.28
RPA3P35244 HMGN1P12-201ENST00000499125 195 ntBASIC0.82□□□□□ -2.28
RPA3P35244 MTND3P3-201ENST00000505004 126 ntBASIC0.82□□□□□ -2.28
RPA3P35244 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
RPA3P35244 SNORD27.1-201ENST00000516319 72 ntBASIC0.82□□□□□ -2.28
RPA3P35244 RNU6-165P-201ENST00000517170 99 ntBASIC0.82□□□□□ -2.28
RPA3P35244 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.82□□□□□ -2.28
RPA3P35244 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.82□□□□□ -2.28
RPA3P35244 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
RPA3P35244 RSL24D1P11-201ENST00000591045 491 ntBASIC0.82□□□□□ -2.28
RPA3P35244 MIR6767-201ENST00000637302 66 ntBASIC0.82□□□□□ -2.28
RPA3P35244 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.82□□□□□ -2.28
RPA3P35244 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
RPA3P35244 RNU6-562P-201ENST00000362731 107 ntBASIC0.81□□□□□ -2.28
RPA3P35244 RNU6-534P-201ENST00000364877 106 ntBASIC0.81□□□□□ -2.28
RPA3P35244 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
RPA3P35244 RNU11-5P-201ENST00000391216 129 ntBASIC0.81□□□□□ -2.28
RPA3P35244 MIR300-201ENST00000401138 83 ntBASIC0.81□□□□□ -2.28
RPA3P35244 HMGN1P14-201ENST00000412459 517 ntBASIC0.81□□□□□ -2.28
RPA3P35244 AC090960.1-201ENST00000421072 306 ntBASIC0.81□□□□□ -2.28
RPA3P35244 AC011233.1-201ENST00000422812 283 ntBASIC0.81□□□□□ -2.28
RPA3P35244 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.81□□□□□ -2.28
RPA3P35244 snoU13.6-201ENST00000458785 104 ntBASIC0.81□□□□□ -2.28
RPA3P35244 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.81□□□□□ -2.28
RPA3P35244 MTND2P14-201ENST00000482139 351 ntBASIC0.81□□□□□ -2.28
RPA3P35244 AC010486.2-201ENST00000505572 483 ntBASIC0.81□□□□□ -2.28
RPA3P35244 MRPS36P3-201ENST00000519284 130 ntBASIC0.81□□□□□ -2.28
RPA3P35244 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.81□□□□□ -2.28
RPA3P35244 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.81□□□□□ -2.28
RPA3P35244 AGGF1P4-201ENST00000568249 801 ntBASIC0.81□□□□□ -2.28
RPA3P35244 AC008088.1-201ENST00000580993 280 ntBASIC0.81□□□□□ -2.28
RPA3P35244 AC136443.5-201ENST00000603741 370 ntBASIC0.81□□□□□ -2.28
RPA3P35244 AC211469.2-201ENST00000605461 205 ntBASIC0.81□□□□□ -2.28
RPA3P35244 AL020996.3-201ENST00000606617 222 ntBASIC0.81□□□□□ -2.28
RPA3P35244 MIR6504-201ENST00000613520 61 ntBASIC0.81□□□□□ -2.28
RPA3P35244 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.81□□□□□ -2.28
RPA3P35244 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.81□□□□□ -2.28
RPA3P35244 AL136221.1-201ENST00000621449 509 ntBASIC0.81□□□□□ -2.28
RPA3P35244 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.81□□□□□ -2.28
RPA3P35244 RNU6-1123P-201ENST00000362347 106 ntBASIC0.8□□□□□ -2.28
RPA3P35244 snoU2-30.2-201ENST00000362805 70 ntBASIC0.8□□□□□ -2.28
RPA3P35244 RNU1-93P-201ENST00000364704 169 ntBASIC0.8□□□□□ -2.28
RPA3P35244 SNORA29-201ENST00000384183 140 ntBASIC0.8□□□□□ -2.28
RPA3P35244 RNU6-1127P-201ENST00000384580 107 ntBASIC0.8□□□□□ -2.28
RPA3P35244 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.8□□□□□ -2.28
RPA3P35244 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
RPA3P35244 AC010099.3-201ENST00000423896 409 ntBASIC0.8□□□□□ -2.28
RPA3P35244 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.8□□□□□ -2.28
RPA3P35244 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.8□□□□□ -2.28
RPA3P35244 HMGN2P34-201ENST00000437647 269 ntBASIC0.8□□□□□ -2.28
RPA3P35244 TPRKBP2-201ENST00000565969 475 ntBASIC0.8□□□□□ -2.28
RPA3P35244 MIR4703-201ENST00000577728 79 ntBASIC0.8□□□□□ -2.28
RPA3P35244 MIR4753-201ENST00000585119 83 ntBASIC0.8□□□□□ -2.28
RPA3P35244 AL929325.1-201ENST00000603096 117 ntBASIC0.8□□□□□ -2.28
RPA3P35244 AL391646.1-201ENST00000603860 190 ntBASIC0.8□□□□□ -2.28
RPA3P35244 Z84480.1-201ENST00000605131 311 ntBASIC0.8□□□□□ -2.28
RPA3P35244 AC009509.4-201ENST00000619202 509 ntBASIC0.8□□□□□ -2.28
RPA3P35244 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
RPA3P35244 AL391516.1-201ENST00000554380 2449 ntBASIC0.8□□□□□ -2.28
RPA3P35244 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
RPA3P35244 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
RPA3P35244 SNORA72.2-201ENST00000365028 127 ntBASIC0.79□□□□□ -2.28
RPA3P35244 RNA5SP109-201ENST00000391010 116 ntBASIC0.79□□□□□ -2.28
RPA3P35244 RPL21P1-201ENST00000399532 476 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms