Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RPL30P15-201ENST00000457129 321 ntBASIC2.41□□□□□ -2.02
HOXA13P31271 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXA13P31271 MIR2053-201ENST00000459295 91 ntBASIC2.41□□□□□ -2.02
HOXA13P31271 AC022447.4-201ENST00000504053 364 ntBASIC2.41□□□□□ -2.02
HOXA13P31271 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXA13P31271 MIR4446-201ENST00000578505 67 ntBASIC2.41□□□□□ -2.02
HOXA13P31271 MIR3124-201ENST00000582636 67 ntBASIC2.41□□□□□ -2.02
HOXA13P31271 AL133215.3-201ENST00000609801 448 ntBASIC2.41□□□□□ -2.02
HOXA13P31271 AC007742.2-201ENST00000618226 398 ntBASIC2.41□□□□□ -2.02
HOXA13P31271 FO624990.1-201ENST00000636373 85 ntBASIC2.41□□□□□ -2.02
HOXA13P31271 AP006437.1-201ENST00000641440 3685 ntBASIC2.41□□□□□ -2.02
HOXA13P31271 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
HOXA13P31271 Y_RNA.48-201ENST00000362710 103 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 RNU1-23P-201ENST00000363361 144 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 RNU6-890P-201ENST00000384121 107 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 RNU6-474P-201ENST00000384243 107 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 RNU6-308P-201ENST00000390957 107 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 RNU6-1050P-201ENST00000410388 107 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 RN7SKP61-201ENST00000410642 295 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXA13P31271 AC243428.1-201ENST00000421099 264 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXA13P31271 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXA13P31271 AL139109.1-201ENST00000455491 297 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 RNU7-152P-201ENST00000458982 64 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 FO393415.2-201ENST00000480085 343 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.4□□□□□ -2.03
HOXA13P31271 AC145146.1-201ENST00000496370 254 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXA13P31271 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXA13P31271 SCARNA16.2-201ENST00000516520 172 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 SNORA31.15-201ENST00000516771 132 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 HSPE1P18-201ENST00000517602 280 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXA13P31271 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXA13P31271 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXA13P31271 AC018889.1-201ENST00000605372 397 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 AC080078.3-201ENST00000605407 463 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
HOXA13P31271 AP000560.1-201ENST00000624150 1937 ntBASIC2.4□□□□□ -2.03
HOXA13P31271 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXA13P31271 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
HOXA13P31271 SNORA67.1-201ENST00000364749 141 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 SNORA36A-201ENST00000384221 132 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 SNORA48.3-201ENST00000391081 134 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 RNU2-2P-201ENST00000410396 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 RNU2-32P-201ENST00000411193 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 AL139156.1-201ENST00000412785 841 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 EIF1AXP1-201ENST00000419267 435 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 RPL23AP95-201ENST00000426806 265 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 MTCO2P12-201ENST00000427426 682 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 SNORD5.1-201ENST00000458800 75 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 UBL5P3-201ENST00000475112 231 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 AC027575.1-201ENST00000481064 460 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXA13P31271 AC093303.1-201ENST00000514549 295 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 RNU6-965P-201ENST00000516721 96 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 SNORA48.11-201ENST00000517015 89 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 RNU1-54P-201ENST00000517181 120 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 AC021231.3-201ENST00000558497 370 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 AC109446.1-201ENST00000566172 220 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 MIR3923-201ENST00000579521 83 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 CPDP1-201ENST00000579660 283 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXA13P31271 MIR8076-201ENST00000611401 83 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.15-201ENST00000611544 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.16-201ENST00000613119 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 Y_RNA.783-201ENST00000613546 102 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.12-201ENST00000613778 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.20-201ENST00000613956 192 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.9-201ENST00000615427 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.11-201ENST00000616345 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.2-201ENST00000616535 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.3-201ENST00000617785 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.19-201ENST00000618602 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 RNU2-1-201ENST00000618664 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.6-201ENST00000619225 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.5-201ENST00000619465 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 U2.10-201ENST00000620268 191 ntBASIC2.39□□□□□ -2.03
HOXA13P31271 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXA13P31271 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXA13P31271 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HOXA13P31271 Z82209.1-201ENST00000422141 2135 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 Y_RNA.31-201ENST00000362574 102 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 RNU6-944P-201ENST00000364023 107 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 RNU6-743P-201ENST00000364151 106 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 SNORD42.2-201ENST00000365570 69 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 RNU6-546P-201ENST00000383991 107 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 MIR524-201ENST00000385242 87 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HOXA13P31271 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HOXA13P31271 MTCYBP6-201ENST00000441810 138 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXA13P31271 RPS29P27-201ENST00000463711 170 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXA13P31271 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXA13P31271 SNORA4.4-201ENST00000515921 135 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 ACA59.1-201ENST00000515966 143 ntBASIC2.38□□□□□ -2.03
HOXA13P31271 Y_RNA.708-201ENST00000516950 96 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms