Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXA11P31270 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HOXA11P31270 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXA11P31270 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXA11P31270 AC069528.2-201ENST00000624849 1991 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 AC004944.1-201ENST00000517807 3059 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HOXA11P31270 RNU6-898P-201ENST00000365627 104 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 SNORA12.2-201ENST00000391040 156 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 SNORA3.2-201ENST00000408221 125 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 RNA5SP494-201ENST00000410653 129 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 MTCO3P19-201ENST00000415864 321 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 AC007969.2-201ENST00000441891 191 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXA11P31270 HMGN2P10-201ENST00000448085 265 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXA11P31270 RN7SL636P-201ENST00000497504 294 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 AC023141.11-201ENST00000508864 202 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXA11P31270 RNA5SP76-201ENST00000516277 87 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXA11P31270 AC006600.1-201ENST00000572529 153 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 AL121655.1-201ENST00000605811 308 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 AC046143.2-201ENST00000609789 160 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 AC064859.1-201ENST00000624741 174 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 SCARNA4-201ENST00000629045 128 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 MIR7157-201ENST00000635801 60 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 AC080128.1-201ENST00000474389 1917 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXA11P31270 HAUS6P2-201ENST00000433254 2404 ntBASIC2.67□□□□□ -1.98
HOXA11P31270 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXA11P31270 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXA11P31270 ADAM3A-203ENST00000461344 2157 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HOXA11P31270 SNORD115-32-201ENST00000364079 82 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 RNU4-50P-201ENST00000364361 141 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 RNU6-505P-201ENST00000384427 107 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 RNU6-1072P-201ENST00000384703 107 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 RNU6-443P-201ENST00000384780 107 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 SNORA69.1-201ENST00000390904 137 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA11P31270 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXA11P31270 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA11P31270 AC243964.1-201ENST00000441814 261 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 RNU6-408P-201ENST00000515910 100 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 RNA5SP24-201ENST00000516478 95 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 MIR2355-201ENST00000517199 87 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 AC034114.1-201ENST00000520293 285 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXA11P31270 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HOXA11P31270 AC110588.1-201ENST00000559699 137 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXA11P31270 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXA11P31270 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HOXA11P31270 AL359198.2-201ENST00000611836 194 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 MIR1244-1-201ENST00000612829 85 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 AL159153.1-201ENST00000619688 317 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 MIR8062-201ENST00000621515 85 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HOXA11P31270 MIR1244-3-201ENST00000635744 85 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 MIR1244-2-201ENST00000636449 85 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 MIR1244-4-202ENST00000636813 85 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 AC241585.2-209ENST00000638217 143 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXA11P31270 AC016717.2-201ENST00000609089 5141 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 AP000560.1-201ENST00000624150 1937 ntBASIC2.66□□□□□ -1.98
HOXA11P31270 RNA5SP393-201ENST00000363423 117 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 Y_RNA.214-201ENST00000364201 112 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 SNORD32A-201ENST00000364805 84 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 RNU6-487P-201ENST00000365430 104 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 RNU6-611P-201ENST00000384276 104 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 RNU6-472P-201ENST00000384299 107 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 BTF3L4P2-201ENST00000392798 346 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 MIR190B-201ENST00000401119 79 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 AL139095.1-201ENST00000404326 391 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 RNU4-53P-201ENST00000410828 140 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 AL358453.1-201ENST00000422522 250 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 CBX3P6-201ENST00000430257 527 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 AC124916.1-201ENST00000444020 547 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 MTCO3P8-201ENST00000453691 755 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA11P31270 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXA11P31270 TRBV12-1-201ENST00000479785 344 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXA11P31270 RNU1-104P-201ENST00000517280 175 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 AP002770.2-201ENST00000543613 532 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 AC103810.6-201ENST00000606708 136 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 AC100812.1-201ENST00000607622 580 ntBASIC2.65□□□□□ -1.99
HOXA11P31270 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HOXA11P31270 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXA11P31270 Y_RNA.27-201ENST00000362540 103 ntBASIC2.64□□□□□ -1.99
HOXA11P31270 RNY3P11-201ENST00000364153 102 ntBASIC2.64□□□□□ -1.99
HOXA11P31270 Y_RNA.210-201ENST00000364161 110 ntBASIC2.64□□□□□ -1.99
HOXA11P31270 RNU6-26P-201ENST00000383985 107 ntBASIC2.64□□□□□ -1.99
HOXA11P31270 RNU6-907P-201ENST00000390924 102 ntBASIC2.64□□□□□ -1.99
HOXA11P31270 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXA11P31270 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms