Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RNU6-222P-201ENST00000362438 107 ntBASIC3.23□□□□□ -1.89
CNGA1P29973 Y_RNA.148-201ENST00000363557 117 ntBASIC3.23□□□□□ -1.89
CNGA1P29973 SNORA69.1-201ENST00000390904 137 ntBASIC3.23□□□□□ -1.89
CNGA1P29973 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.23□□□□□ -1.89
CNGA1P29973 AC104389.3-201ENST00000445629 235 ntBASIC3.23□□□□□ -1.89
CNGA1P29973 CHEK2P4-201ENST00000450340 246 ntBASIC3.23□□□□□ -1.89
CNGA1P29973 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.23□□□□□ -1.89
CNGA1P29973 RNU4-77P-201ENST00000516692 156 ntBASIC3.23□□□□□ -1.89
CNGA1P29973 SNORA48.11-201ENST00000517015 89 ntBASIC3.23□□□□□ -1.89
CNGA1P29973 AC090617.3-201ENST00000573670 475 ntBASIC3.23□□□□□ -1.89
CNGA1P29973 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.23□□□□□ -1.89
CNGA1P29973 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.23□□□□□ -1.89
CNGA1P29973 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CNGA1P29973 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CNGA1P29973 MTND5P16-201ENST00000460269 1703 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 BX322639.1-202ENST00000423987 2213 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 Y_RNA.216-201ENST00000364205 93 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 RNA5SP125-201ENST00000364843 120 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 SNORA22B-201ENST00000383876 138 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 RNU6-541P-201ENST00000384709 110 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 RNA5SP213-201ENST00000391031 106 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 RNU6-159P-201ENST00000391080 106 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 Y_RNA.592-201ENST00000410274 109 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 RNU2-63P-201ENST00000410792 194 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.22□□□□□ -1.89
CNGA1P29973 CBX3P6-201ENST00000430257 527 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 USP9YP16-201ENST00000430287 407 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.22□□□□□ -1.89
CNGA1P29973 AL121890.1-201ENST00000435457 205 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 USP9YP23-201ENST00000455085 407 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 RNU6-1114P-201ENST00000516022 107 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CNGA1P29973 AP003072.1-201ENST00000531740 145 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.22□□□□□ -1.89
CNGA1P29973 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.22□□□□□ -1.89
CNGA1P29973 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.22□□□□□ -1.89
CNGA1P29973 AC006157.1-201ENST00000611750 366 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 AL449363.1-201ENST00000617815 186 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.22□□□□□ -1.89
CNGA1P29973 AC243829.7-201ENST00000633081 225 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 MIR4272-201ENST00000635924 64 ntBASIC3.22□□□□□ -1.89
CNGA1P29973 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CNGA1P29973 RNU6-859P-201ENST00000362728 107 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 RNY3P11-201ENST00000364153 102 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 SNORD56.5-201ENST00000364281 72 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 Y_RNA.326-201ENST00000365176 113 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.21□□□□□ -1.9
CNGA1P29973 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.21□□□□□ -1.9
CNGA1P29973 RNU7-87P-201ENST00000459343 62 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 AC103975.1-201ENST00000482506 483 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 CKS1BP2-201ENST00000497342 240 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 RNU6-988P-201ENST00000519081 107 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 AC023442.1-201ENST00000531247 422 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 AC026470.2-201ENST00000561492 181 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 AC083806.3-201ENST00000614016 455 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 AL606534.2-204ENST00000635008 178 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.21□□□□□ -1.9
CNGA1P29973 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.21□□□□□ -1.9
CNGA1P29973 Z82195.2-201ENST00000612348 18351 ntBASIC3.21□□□□□ -1.9
CNGA1P29973 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CNGA1P29973 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CNGA1P29973 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CNGA1P29973 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CNGA1P29973 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CNGA1P29973 Y_RNA.39-201ENST00000362620 98 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 SNORA63-201ENST00000363450 132 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 RNU1-112P-201ENST00000364401 164 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 Y_RNA.358-201ENST00000365491 99 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 Y_RNA.557-201ENST00000384680 107 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 MIR10B-201ENST00000385011 110 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 RNU2-25P-201ENST00000411041 191 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.2□□□□□ -1.9
CNGA1P29973 RPL39P40-201ENST00000445481 146 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 U8.22-201ENST00000459141 133 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 RNU6-911P-201ENST00000516523 104 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 UBL5P4-201ENST00000562584 236 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 AC023824.2-201ENST00000566185 400 ntBASIC3.2□□□□□ -1.9
CNGA1P29973 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CNGA1P29973 Z82209.1-201ENST00000422141 2135 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 RNU1-23P-201ENST00000363361 144 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 Y_RNA.202-201ENST00000364083 110 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CNGA1P29973 AL138827.1-201ENST00000402666 306 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 Y_RNA.605-201ENST00000410577 105 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 EIF1P2-201ENST00000428233 350 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 AC112220.1-201ENST00000434628 355 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 AC096638.1-201ENST00000444678 216 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 AL513328.1-201ENST00000446460 224 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 RNU7-169P-201ENST00000459456 61 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.19□□□□□ -1.9
CNGA1P29973 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.19□□□□□ -1.9
CNGA1P29973 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.19□□□□□ -1.9
CNGA1P29973 RNU6-475P-201ENST00000516073 104 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 RNA5SP76-201ENST00000516277 87 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 MIR2355-201ENST00000517199 87 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 HSPE1P18-201ENST00000517602 280 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.19□□□□□ -1.9
CNGA1P29973 DEFB131C-201ENST00000528817 165 ntBASIC3.19□□□□□ -1.9
CNGA1P29973 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.19□□□□□ -1.9
CNGA1P29973 AC090517.1-201ENST00000569307 266 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 457.8 ms