Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.55□□□□□ -2.32
COL4A5P29400 AC090888.2-201ENST00000559765 1144 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 BX284668.6-201ENST00000606899 438 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.55□□□□□ -2.32
COL4A5P29400 AC008250.2-201ENST00000615261 205 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
COL4A5P29400 AC008147.4-201ENST00000617570 1204 ntBASIC0.55□□□□□ -2.32
COL4A5P29400 AC092268.1-201ENST00000342691 405 ntBASIC0.54□□□□□ -2.32
COL4A5P29400 SNORA63D-201ENST00000364359 132 ntBASIC0.54□□□□□ -2.32
COL4A5P29400 SNORA40.4-201ENST00000390971 128 ntBASIC0.54□□□□□ -2.32
COL4A5P29400 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.54□□□□□ -2.32
COL4A5P29400 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.54□□□□□ -2.32
COL4A5P29400 MTCO3P7-201ENST00000510008 774 ntBASIC0.54□□□□□ -2.32
COL4A5P29400 AC112206.4-201ENST00000515142 405 ntBASIC0.54□□□□□ -2.32
COL4A5P29400 RNU6-1098P-201ENST00000516772 96 ntBASIC0.54□□□□□ -2.32
COL4A5P29400 AC136932.1-201ENST00000574771 208 ntBASIC0.54□□□□□ -2.32
COL4A5P29400 AC069431.2-201ENST00000604149 1099 ntBASIC0.54□□□□□ -2.32
COL4A5P29400 AC027807.2-201ENST00000616099 408 ntBASIC0.54□□□□□ -2.32
COL4A5P29400 AC027335.2-201ENST00000624030 375 ntBASIC0.54□□□□□ -2.32
COL4A5P29400 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.53□□□□□ -2.32
COL4A5P29400 RNU6-116P-201ENST00000384042 109 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 RNU6-1200P-201ENST00000384162 107 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 RNU6-378P-201ENST00000384324 107 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 SNORA24.1-201ENST00000384401 135 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 RNU6-1026P-201ENST00000384465 108 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
COL4A5P29400 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC010975.2-201ENST00000427781 588 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC245047.4-201ENST00000433189 144 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 snoU13.19-201ENST00000459148 104 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC114982.1-201ENST00000469402 321 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC016632.1-201ENST00000503994 196 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.53□□□□□ -2.32
COL4A5P29400 RNU6-948P-201ENST00000516374 107 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 RNU6-567P-201ENST00000516746 107 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC022616.6-201ENST00000520479 119 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC021231.3-201ENST00000558497 370 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC004817.2-201ENST00000561794 651 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 MIR3664-201ENST00000579074 99 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 MIR4999-201ENST00000585029 91 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC005771.1-201ENST00000585581 349 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 BNIP3P16-201ENST00000589779 534 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC108747.1-201ENST00000609508 535 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 AC009878.1-201ENST00000621819 340 ntBASIC0.53□□□□□ -2.32
COL4A5P29400 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.33
COL4A5P29400 MIR302D-201ENST00000362275 68 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 RNU6-950P-201ENST00000384651 107 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 RNU6-1054P-201ENST00000411293 104 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 C1DP2-201ENST00000418167 426 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 TOMM22P2-201ENST00000430735 237 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.53□□□□□ -2.33
COL4A5P29400 RPS24P1-201ENST00000438550 371 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.53□□□□□ -2.33
COL4A5P29400 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.53□□□□□ -2.33
COL4A5P29400 RBBP4P6-201ENST00000508098 202 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.53□□□□□ -2.33
COL4A5P29400 SNORA31.4-201ENST00000516049 129 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 RNA5SP503-201ENST00000517047 117 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.53□□□□□ -2.33
COL4A5P29400 MIR4709-201ENST00000577272 72 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.53□□□□□ -2.33
COL4A5P29400 AC012507.3-201ENST00000603556 477 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 AC105148.1-201ENST00000604961 409 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 AC013244.3-201ENST00000605614 388 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 AC106800.4-201ENST00000614905 153 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 AL049777.1-201ENST00000622740 518 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 U6.114-201ENST00000636407 96 ntBASIC0.53□□□□□ -2.33
COL4A5P29400 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
COL4A5P29400 MTND1P32-201ENST00000433043 938 ntBASIC0.52□□□□□ -2.33
COL4A5P29400 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.52□□□□□ -2.33
COL4A5P29400 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.52□□□□□ -2.33
COL4A5P29400 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.52□□□□□ -2.33
COL4A5P29400 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
COL4A5P29400 AC136628.3-201ENST00000521868 290 ntBASIC0.52□□□□□ -2.33
COL4A5P29400 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.52□□□□□ -2.33
COL4A5P29400 AL442163.3-201ENST00000554110 156 ntBASIC0.52□□□□□ -2.33
COL4A5P29400 AC091489.2-201ENST00000566263 604 ntBASIC0.52□□□□□ -2.33
COL4A5P29400 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.52□□□□□ -2.33
COL4A5P29400 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
COL4A5P29400 RNU6-1287P-201ENST00000362914 107 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 SNORD114-15-201ENST00000364687 72 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 RNY4P3-201ENST00000365254 95 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 RNU6-1060P-201ENST00000384664 107 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 MIR608-201ENST00000384820 100 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 MIR329-1-201ENST00000385028 80 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 SNORA12.2-201ENST00000391040 156 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AL590135.1-201ENST00000422215 156 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AC019205.3-201ENST00000424573 156 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AL669831.1-202ENST00000428504 417 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AL606489.2-201ENST00000433886 234 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 GTF2IP13-201ENST00000438487 386 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AC016700.2-201ENST00000446011 156 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AL360271.2-201ENST00000447710 161 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AC015911.1-201ENST00000495111 156 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 RNU6-1041P-201ENST00000516254 102 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AC022878.1-201ENST00000530684 149 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.51□□□□□ -2.33
COL4A5P29400 AC091805.2-201ENST00000603848 235 ntBASIC0.51□□□□□ -2.33
COL4A5P29400 AL158050.2-201ENST00000605336 568 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms