Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.07□□□□□ -2.08
SHC1P29353 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.07□□□□□ -2.08
SHC1P29353 AL358176.2-201ENST00000425769 204 ntBASIC2.07□□□□□ -2.08
SHC1P29353 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.07□□□□□ -2.08
SHC1P29353 MTCO3P29-201ENST00000432119 779 ntBASIC2.07□□□□□ -2.08
SHC1P29353 Z82188.1-201ENST00000436709 154 ntBASIC2.07□□□□□ -2.08
SHC1P29353 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.07□□□□□ -2.08
SHC1P29353 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SHC1P29353 AC006026.2-201ENST00000457376 180 ntBASIC2.07□□□□□ -2.08
SHC1P29353 MTND5P22-201ENST00000458380 195 ntBASIC2.07□□□□□ -2.08
SHC1P29353 RNU7-169P-201ENST00000459456 61 ntBASIC2.07□□□□□ -2.08
SHC1P29353 MTATP8P1-201ENST00000467115 207 ntBASIC2.07□□□□□ -2.08
SHC1P29353 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
SHC1P29353 RPL30P1-201ENST00000488676 339 ntBASIC2.07□□□□□ -2.08
SHC1P29353 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.07□□□□□ -2.08
SHC1P29353 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.07□□□□□ -2.08
SHC1P29353 AC010928.2-201ENST00000588017 287 ntBASIC2.07□□□□□ -2.08
SHC1P29353 AL606534.2-204ENST00000635008 178 ntBASIC2.07□□□□□ -2.08
SHC1P29353 MIR4272-201ENST00000635924 64 ntBASIC2.07□□□□□ -2.08
SHC1P29353 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SHC1P29353 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHC1P29353 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.07□□□□□ -2.08
SHC1P29353 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHC1P29353 MTND5P6-201ENST00000422338 1798 ntBASIC2.06□□□□□ -2.08
SHC1P29353 RBBP8P1-201ENST00000449447 1844 ntBASIC2.06□□□□□ -2.08
SHC1P29353 RNU6-450P-201ENST00000364654 107 ntBASIC2.06□□□□□ -2.08
SHC1P29353 RNU6-26P-201ENST00000383985 107 ntBASIC2.06□□□□□ -2.08
SHC1P29353 RNU6-1083P-201ENST00000384022 107 ntBASIC2.06□□□□□ -2.08
SHC1P29353 RNU6-622P-201ENST00000384272 103 ntBASIC2.06□□□□□ -2.08
SHC1P29353 RNU6-1105P-201ENST00000384774 107 ntBASIC2.06□□□□□ -2.08
SHC1P29353 MIR568-201ENST00000385036 95 ntBASIC2.06□□□□□ -2.08
SHC1P29353 AL133475.1-201ENST00000404414 305 ntBASIC2.06□□□□□ -2.08
SHC1P29353 RNU6-1140P-201ENST00000410517 106 ntBASIC2.06□□□□□ -2.08
SHC1P29353 Y_RNA.605-201ENST00000410577 105 ntBASIC2.06□□□□□ -2.08
SHC1P29353 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.06□□□□□ -2.08
SHC1P29353 AC004383.1-201ENST00000438135 289 ntBASIC2.06□□□□□ -2.08
SHC1P29353 OR2AQ1P-201ENST00000451972 200 ntBASIC2.06□□□□□ -2.08
SHC1P29353 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.06□□□□□ -2.08
SHC1P29353 MED28P2-201ENST00000475771 317 ntBASIC2.06□□□□□ -2.08
SHC1P29353 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.06□□□□□ -2.08
SHC1P29353 RNU6-764P-201ENST00000516396 105 ntBASIC2.06□□□□□ -2.08
SHC1P29353 RNA5SP24-201ENST00000516478 95 ntBASIC2.06□□□□□ -2.08
SHC1P29353 RNU1-104P-201ENST00000517280 175 ntBASIC2.06□□□□□ -2.08
SHC1P29353 MIR5007-201ENST00000583098 95 ntBASIC2.06□□□□□ -2.08
SHC1P29353 MIR5188-201ENST00000583467 113 ntBASIC2.06□□□□□ -2.08
SHC1P29353 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.06□□□□□ -2.08
SHC1P29353 AL449363.1-201ENST00000617815 186 ntBASIC2.06□□□□□ -2.08
SHC1P29353 AC024581.2-201ENST00000619986 252 ntBASIC2.06□□□□□ -2.08
SHC1P29353 AL078596.1-201ENST00000624856 447 ntBASIC2.06□□□□□ -2.08
SHC1P29353 SNORA43.4-201ENST00000629559 138 ntBASIC2.06□□□□□ -2.08
SHC1P29353 MTND5P16-201ENST00000460269 1703 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AC010889.1-201ENST00000566193 2666 ntBASIC2.05□□□□□ -2.08
SHC1P29353 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHC1P29353 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHC1P29353 Y_RNA.39-201ENST00000362620 98 ntBASIC2.05□□□□□ -2.08
SHC1P29353 Y_RNA.153-201ENST00000363615 91 ntBASIC2.05□□□□□ -2.08
SHC1P29353 RNU4-42P-201ENST00000364738 142 ntBASIC2.05□□□□□ -2.08
SHC1P29353 SNORA67.1-201ENST00000364749 141 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AC117470.1-201ENST00000381974 330 ntBASIC2.05□□□□□ -2.08
SHC1P29353 Y_RNA.405-201ENST00000383979 100 ntBASIC2.05□□□□□ -2.08
SHC1P29353 Y_RNA.451-201ENST00000384200 100 ntBASIC2.05□□□□□ -2.08
SHC1P29353 Y_RNA.524-201ENST00000384564 100 ntBASIC2.05□□□□□ -2.08
SHC1P29353 Y_RNA.561-201ENST00000384694 100 ntBASIC2.05□□□□□ -2.08
SHC1P29353 RNU6-1072P-201ENST00000384703 107 ntBASIC2.05□□□□□ -2.08
SHC1P29353 RNU6-443P-201ENST00000384780 107 ntBASIC2.05□□□□□ -2.08
SHC1P29353 SNORA12.2-201ENST00000391040 156 ntBASIC2.05□□□□□ -2.08
SHC1P29353 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
SHC1P29353 RPL23AP95-201ENST00000426806 265 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
SHC1P29353 AC092423.1-201ENST00000430165 186 ntBASIC2.05□□□□□ -2.08
SHC1P29353 MTND3P2-201ENST00000438452 342 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.05□□□□□ -2.08
SHC1P29353 AC112492.4-201ENST00000456549 352 ntBASIC2.05□□□□□ -2.08
SHC1P29353 U8.20-201ENST00000459445 131 ntBASIC2.05□□□□□ -2.08
SHC1P29353 SNRPGP7-201ENST00000469016 106 ntBASIC2.05□□□□□ -2.08
SHC1P29353 RPL30P12-201ENST00000474666 353 ntBASIC2.05□□□□□ -2.08
SHC1P29353 RPL30P10-201ENST00000488148 337 ntBASIC2.05□□□□□ -2.08
SHC1P29353 RPL23AP75-201ENST00000491601 451 ntBASIC2.05□□□□□ -2.08
SHC1P29353 GZMAP1-201ENST00000503054 631 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.05□□□□□ -2.08
SHC1P29353 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AC023442.1-201ENST00000531247 422 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AL590705.4-201ENST00000532209 134 ntBASIC2.05□□□□□ -2.08
SHC1P29353 GNAI2P1-201ENST00000541815 315 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AP002770.2-201ENST00000543613 532 ntBASIC2.05□□□□□ -2.08
SHC1P29353 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.05□□□□□ -2.08
SHC1P29353 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.05□□□□□ -2.08
SHC1P29353 AC004584.2-201ENST00000570407 410 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.05□□□□□ -2.08
SHC1P29353 MIR6895-201ENST00000613497 78 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AL132822.1-201ENST00000617063 513 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.05□□□□□ -2.08
SHC1P29353 MIR6766-201ENST00000622641 72 ntBASIC2.05□□□□□ -2.08
SHC1P29353 AC004944.1-201ENST00000517807 3059 ntBASIC2.05□□□□□ -2.08
SHC1P29353 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.05□□□□□ -2.08
SHC1P29353 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHC1P29353 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHC1P29353 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHC1P29353 SNORA29-201ENST00000384183 140 ntBASIC2.04□□□□□ -2.08
SHC1P29353 RNU6-708P-201ENST00000384217 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms