Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SDR42E1P4-201ENST00000620894 481 ntBASIC2.03□□□□□ -2.08
ERCC2P18074 LINC02555-201ENST00000563933 1951 ntBASIC2.03□□□□□ -2.08
ERCC2P18074 AC233981.2-201ENST00000611524 1614 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ERCC2P18074 RNU1-76P-201ENST00000362903 159 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 Y_RNA.157-201ENST00000363638 102 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 SNORA18.2-201ENST00000383865 132 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 SNORD116-11-201ENST00000383882 92 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 SNORA32.2-201ENST00000384049 122 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 AC009161.1-201ENST00000417306 376 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 AL158823.1-201ENST00000418441 478 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 Z82205.1-201ENST00000428456 297 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 AL353572.1-201ENST00000442490 417 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.02□□□□□ -2.09
ERCC2P18074 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 AC130509.1-201ENST00000464158 433 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 AF186996.7-201ENST00000492781 209 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 RPS23P5-201ENST00000495419 428 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 RNU6-273P-201ENST00000516937 96 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 DEFB131C-201ENST00000528817 165 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 AC243960.4-201ENST00000600532 288 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 RPL17P51-201ENST00000605218 238 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.02□□□□□ -2.09
ERCC2P18074 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
ERCC2P18074 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
ERCC2P18074 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ERCC2P18074 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ERCC2P18074 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
ERCC2P18074 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
ERCC2P18074 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.01□□□□□ -2.09
ERCC2P18074 Y_RNA.599-201ENST00000410489 109 ntBASIC2.01□□□□□ -2.09
ERCC2P18074 RNA5SP501-201ENST00000410990 112 ntBASIC2.01□□□□□ -2.09
ERCC2P18074 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.01□□□□□ -2.09
ERCC2P18074 AL513124.1-201ENST00000450410 614 ntBASIC2.01□□□□□ -2.09
ERCC2P18074 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.01□□□□□ -2.09
ERCC2P18074 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.01□□□□□ -2.09
ERCC2P18074 MIR3169-201ENST00000578032 83 ntBASIC2.01□□□□□ -2.09
ERCC2P18074 AC016727.2-201ENST00000603988 621 ntBASIC2.01□□□□□ -2.09
ERCC2P18074 CYP2C61P-201ENST00000604072 290 ntBASIC2.01□□□□□ -2.09
ERCC2P18074 AL773524.1-201ENST00000614065 229 ntBASIC2.01□□□□□ -2.09
ERCC2P18074 AC002553.4-201ENST00000616896 331 ntBASIC2.01□□□□□ -2.09
ERCC2P18074 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.01□□□□□ -2.09
ERCC2P18074 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.01□□□□□ -2.09
ERCC2P18074 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.01□□□□□ -2.09
ERCC2P18074 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
ERCC2P18074 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2□□□□□ -2.09
ERCC2P18074 MIR340-201ENST00000362125 95 ntBASIC2□□□□□ -2.09
ERCC2P18074 SNORD50.1-201ENST00000362987 71 ntBASIC2□□□□□ -2.09
ERCC2P18074 SNORD31B-201ENST00000364977 69 ntBASIC2□□□□□ -2.09
ERCC2P18074 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
ERCC2P18074 RNU6-831P-201ENST00000384548 107 ntBASIC2□□□□□ -2.09
ERCC2P18074 MIR517A-201ENST00000385001 87 ntBASIC2□□□□□ -2.09
ERCC2P18074 RPS26P42-201ENST00000413485 326 ntBASIC2□□□□□ -2.09
ERCC2P18074 AC139712.2-201ENST00000424302 339 ntBASIC2□□□□□ -2.09
ERCC2P18074 AL035666.1-201ENST00000446195 348 ntBASIC2□□□□□ -2.09
ERCC2P18074 NFU1P2-201ENST00000448700 469 ntBASIC2□□□□□ -2.09
ERCC2P18074 AC087477.1-201ENST00000465747 340 ntBASIC2□□□□□ -2.09
ERCC2P18074 RPL23AP75-201ENST00000491601 451 ntBASIC2□□□□□ -2.09
ERCC2P18074 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2□□□□□ -2.09
ERCC2P18074 RNU6-864P-201ENST00000516256 108 ntBASIC2□□□□□ -2.09
ERCC2P18074 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2□□□□□ -2.09
ERCC2P18074 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2□□□□□ -2.09
ERCC2P18074 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2□□□□□ -2.09
ERCC2P18074 POLR3GP2-201ENST00000588366 668 ntBASIC2□□□□□ -2.09
ERCC2P18074 AC008749.1-201ENST00000597650 306 ntBASIC2□□□□□ -2.09
ERCC2P18074 AL109918.3-201ENST00000603072 338 ntBASIC2□□□□□ -2.09
ERCC2P18074 AC116312.1-201ENST00000606841 314 ntBASIC2□□□□□ -2.09
ERCC2P18074 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2□□□□□ -2.09
ERCC2P18074 AC006504.8-201ENST00000621046 635 ntBASIC2□□□□□ -2.09
ERCC2P18074 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2□□□□□ -2.09
ERCC2P18074 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
ERCC2P18074 AC092881.1-201ENST00000638218 2733 ntBASIC2□□□□□ -2.09
ERCC2P18074 KPNA2P1-201ENST00000458289 1591 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 RNU6-1026P-201ENST00000384465 108 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 SNORA8-201ENST00000384574 139 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 MIR549A-201ENST00000385268 96 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ERCC2P18074 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.99□□□□□ -2.09
ERCC2P18074 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.99□□□□□ -2.09
ERCC2P18074 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.99□□□□□ -2.09
ERCC2P18074 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.99□□□□□ -2.09
ERCC2P18074 RPL23AP6-201ENST00000446637 472 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 OR2AQ1P-201ENST00000451972 200 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 AC069439.1-201ENST00000494739 167 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 MTCO2P30-201ENST00000503662 364 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 RNU2-44P-201ENST00000516795 194 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.99□□□□□ -2.09
ERCC2P18074 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.99□□□□□ -2.09
ERCC2P18074 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.99□□□□□ -2.09
ERCC2P18074 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.99□□□□□ -2.09
ERCC2P18074 AC005034.5-201ENST00000604219 466 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 AC019193.3-201ENST00000609144 554 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 AL627230.6-201ENST00000611129 280 ntBASIC1.99□□□□□ -2.09
ERCC2P18074 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
ERCC2P18074 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ERCC2P18074 RNU2-20P-201ENST00000410425 191 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms