Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2□□□□□ -2.09
PDGFRAP16234 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
PDGFRAP16234 ZNF355P-201ENST00000427301 3216 ntBASIC2□□□□□ -2.09
PDGFRAP16234 RNU1-76P-201ENST00000362903 159 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 Y_RNA.135-201ENST00000363439 95 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 Y_RNA.295-201ENST00000364918 102 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 RNU6-968P-201ENST00000384076 107 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 MIR504-201ENST00000385065 83 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PDGFRAP16234 AC019129.1-201ENST00000403786 261 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 MTND1P11-201ENST00000456661 876 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 RNU6-1098P-201ENST00000516772 96 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 MRPS36P4-201ENST00000534436 298 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 AC090517.1-201ENST00000569307 266 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.99□□□□□ -2.09
PDGFRAP16234 MIR3672-201ENST00000584290 82 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 AL773524.1-201ENST00000614065 229 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 MIR7843-201ENST00000622274 79 ntBASIC1.99□□□□□ -2.09
PDGFRAP16234 LINC02555-201ENST00000563933 1951 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 Y_RNA.453-201ENST00000384223 109 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 RNU6-95P-201ENST00000384697 107 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 MIR597-201ENST00000384968 97 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 RNA5SP494-201ENST00000410653 129 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 AL513185.2-201ENST00000425543 193 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 AL035666.1-201ENST00000446195 348 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.98□□□□□ -2.09
PDGFRAP16234 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.98□□□□□ -2.09
PDGFRAP16234 snoU13.6-201ENST00000458785 104 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 RNU1-131P-201ENST00000458943 161 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 TOMM22P6-201ENST00000465035 409 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 AC116337.1-201ENST00000509680 687 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 RNU5F-4P-201ENST00000516581 114 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 AP005639.2-201ENST00000527592 928 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.98□□□□□ -2.09
PDGFRAP16234 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 AC023043.2-201ENST00000589678 1026 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 AC146944.4-201ENST00000602697 718 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 CYP2C61P-201ENST00000604072 290 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 U1.36-201ENST00000620684 176 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 AC130454.1-201ENST00000622948 401 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 AC090617.10-201ENST00000624308 134 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 AC073869.6-201ENST00000640656 341 ntBASIC1.98□□□□□ -2.09
PDGFRAP16234 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PDGFRAP16234 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PDGFRAP16234 RNU6-562P-201ENST00000362731 107 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 Y_RNA.157-201ENST00000363638 102 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 RNA5SP493-201ENST00000364115 91 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 SNORD114-6-201ENST00000364393 72 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 SNORD31B-201ENST00000364977 69 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 RNU6-438P-201ENST00000365561 103 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 SNORA32.2-201ENST00000384049 122 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 MIR583-201ENST00000384846 75 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 RNA5SP212-201ENST00000391223 107 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 SNORD115-47-201ENST00000391226 86 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 RNU6-192P-201ENST00000391253 100 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 AL445685.2-201ENST00000422551 342 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 MTND1P4-201ENST00000435196 415 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 UBE2V1P8-201ENST00000437166 265 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.97□□□□□ -2.09
PDGFRAP16234 RNU7-14P-201ENST00000459331 62 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 RPS23P5-201ENST00000495419 428 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 MTCYBP18-201ENST00000501056 747 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 AP005660.1-201ENST00000522972 293 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.97□□□□□ -2.09
PDGFRAP16234 AC110588.1-201ENST00000559699 137 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 MIR3169-201ENST00000578032 83 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
PDGFRAP16234 MIR3976-201ENST00000606807 139 ntBASIC1.97□□□□□ -2.09
PDGFRAP16234 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.97□□□□□ -2.09
PDGFRAP16234 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
PDGFRAP16234 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
PDGFRAP16234 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PDGFRAP16234 RNU6-23P-201ENST00000363283 107 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 Y_RNA.151-201ENST00000363566 112 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 Y_RNA.212-201ENST00000364177 102 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 Y_RNA.505-201ENST00000384489 102 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 SNORA8-201ENST00000384574 139 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 U8.13-201ENST00000390842 128 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 AC009161.1-201ENST00000417306 376 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 AL590632.1-201ENST00000424289 371 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.96□□□□□ -2.1
PDGFRAP16234 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 AL353572.1-201ENST00000442490 417 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 PCMTD1P1-201ENST00000455560 355 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 AC011352.1-201ENST00000512300 793 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.96□□□□□ -2.1
PDGFRAP16234 RNU6-1314P-201ENST00000517139 104 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.96□□□□□ -2.1
PDGFRAP16234 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.96□□□□□ -2.1
PDGFRAP16234 AC080078.2-201ENST00000603766 501 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 AC009033.1-201ENST00000624279 431 ntBASIC1.96□□□□□ -2.1
PDGFRAP16234 AC233981.2-201ENST00000611524 1614 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 MIR340-201ENST00000362125 95 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms