Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 MIR6086-201ENST00000638065 55 ntBASIC0.35□□□□□ -2.35
HLA-EP13747 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.35
HLA-EP13747 AC073343.1-201ENST00000328239 651 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 RNU1-76P-201ENST00000362903 159 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 U3.8-201ENST00000363675 217 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 RNU6-371P-201ENST00000364283 108 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.34□□□□□ -2.36
HLA-EP13747 AL353777.1-201ENST00000425552 326 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AC244023.1-201ENST00000426884 112 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AC010975.2-201ENST00000427781 588 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 MTCO3P18-201ENST00000440206 761 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 C1DP4-201ENST00000455429 424 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AC007547.1-201ENST00000462177 490 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AP000797.1-201ENST00000478870 387 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AC105758.1-201ENST00000506038 399 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 MTCO3P7-201ENST00000510008 774 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.34□□□□□ -2.36
HLA-EP13747 AC099786.3-201ENST00000565735 1410 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AC091489.2-201ENST00000566263 604 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AL031281.1-201ENST00000604049 488 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AC242498.1-201ENST00000604134 111 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AL139286.2-201ENST00000606838 396 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AC243994.1-201ENST00000618627 109 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 AP000943.4-201ENST00000622912 357 ntBASIC0.34□□□□□ -2.36
HLA-EP13747 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.34□□□□□ -2.36
HLA-EP13747 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
HLA-EP13747 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
HLA-EP13747 SNORA80D-201ENST00000384488 135 ntBASIC0.33□□□□□ -2.36
HLA-EP13747 RPS20P2-201ENST00000402520 389 ntBASIC0.33□□□□□ -2.36
HLA-EP13747 AL031577.2-201ENST00000404133 280 ntBASIC0.33□□□□□ -2.36
HLA-EP13747 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.33□□□□□ -2.36
HLA-EP13747 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.33□□□□□ -2.36
HLA-EP13747 TRBVB-201ENST00000477100 408 ntBASIC0.33□□□□□ -2.36
HLA-EP13747 AC091435.1-201ENST00000505442 584 ntBASIC0.33□□□□□ -2.36
HLA-EP13747 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.33□□□□□ -2.36
HLA-EP13747 EIF4A1P12-201ENST00000551910 141 ntBASIC0.33□□□□□ -2.36
HLA-EP13747 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.33□□□□□ -2.36
HLA-EP13747 MIR5697-201ENST00000578045 78 ntBASIC0.33□□□□□ -2.36
HLA-EP13747 AC146944.4-201ENST00000602697 718 ntBASIC0.33□□□□□ -2.36
HLA-EP13747 AP001596.2-201ENST00000608410 312 ntBASIC0.33□□□□□ -2.36
HLA-EP13747 AC009509.4-201ENST00000619202 509 ntBASIC0.33□□□□□ -2.36
HLA-EP13747 BX322639.1-202ENST00000423987 2213 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 Y_RNA.465-201ENST00000384293 102 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RNU6-378P-201ENST00000384324 107 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RNU6-505P-201ENST00000384427 107 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RNU6-692P-201ENST00000384496 107 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RNA5SP109-201ENST00000391010 116 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RNU6-293P-201ENST00000411259 106 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.32□□□□□ -2.36
HLA-EP13747 AC114491.1-201ENST00000416095 246 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 CALM2P2-201ENST00000428512 440 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.32□□□□□ -2.36
HLA-EP13747 MTND1P12-201ENST00000455231 147 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RPS26P48-201ENST00000491713 339 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RPS23P5-201ENST00000495419 428 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RNU6-201P-201ENST00000517100 61 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 APOOP3-201ENST00000536787 586 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 AC090517.1-201ENST00000569307 266 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 MIR5692A1-201ENST00000580523 69 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 AC010620.1-201ENST00000601088 1102 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 AL513534.2-201ENST00000603836 250 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 AC064872.1-201ENST00000604823 1072 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 AC121334.2-201ENST00000605387 271 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.32□□□□□ -2.36
HLA-EP13747 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.32□□□□□ -2.36
HLA-EP13747 GHRLOS.1-201ENST00000610995 70 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RNU6-1192P-201ENST00000612197 107 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.32□□□□□ -2.36
HLA-EP13747 RNU6-489P-201ENST00000618289 107 ntBASIC0.32□□□□□ -2.36
HLA-EP13747 RNU6-945P-201ENST00000383947 107 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 RNU6-45P-201ENST00000384471 107 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 RNU6-1031P-201ENST00000384773 107 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.31□□□□□ -2.36
HLA-EP13747 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
HLA-EP13747 AC010154.1-201ENST00000425857 269 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 AL035398.1-201ENST00000430869 322 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 USP9YP28-201ENST00000435142 589 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 AC098869.1-201ENST00000481627 292 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 MTND3P25-201ENST00000509243 135 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.31□□□□□ -2.36
HLA-EP13747 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.31□□□□□ -2.36
HLA-EP13747 MIR4307-201ENST00000582802 84 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.31□□□□□ -2.36
HLA-EP13747 AC078795.3-201ENST00000602913 472 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 RPL17P51-201ENST00000605218 238 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 AL157786.1-207ENST00000627771 695 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.31□□□□□ -2.36
HLA-EP13747 RNU6-545P-201ENST00000362681 104 ntBASIC0.3□□□□□ -2.36
HLA-EP13747 snoU2-30.2-201ENST00000362805 70 ntBASIC0.3□□□□□ -2.36
HLA-EP13747 SNORD116.1-201ENST00000365628 92 ntBASIC0.3□□□□□ -2.36
HLA-EP13747 RNU6-950P-201ENST00000384651 107 ntBASIC0.3□□□□□ -2.36
HLA-EP13747 RNU2-3P-201ENST00000410144 191 ntBASIC0.3□□□□□ -2.36
HLA-EP13747 AC078809.1-201ENST00000427601 140 ntBASIC0.3□□□□□ -2.36
HLA-EP13747 AL162395.1-201ENST00000457882 422 ntBASIC0.3□□□□□ -2.36
HLA-EP13747 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.3□□□□□ -2.36
HLA-EP13747 RNU6-1003P-201ENST00000517099 105 ntBASIC0.3□□□□□ -2.36
HLA-EP13747 MTATP6P15-201ENST00000527233 835 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms