Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC244636.1-201ENST00000421152 228 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL11A1P12107 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.05□□□□□ -2.24
COL11A1P12107 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL11A1P12107 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.05□□□□□ -2.24
COL11A1P12107 AC013470.1-201ENST00000453438 462 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.05□□□□□ -2.24
COL11A1P12107 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.05□□□□□ -2.24
COL11A1P12107 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.05□□□□□ -2.24
COL11A1P12107 MTCYBP40-201ENST00000509390 1135 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.05□□□□□ -2.24
COL11A1P12107 RNU5F-2P-201ENST00000516066 82 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.05□□□□□ -2.24
COL11A1P12107 AC090115.3-201ENST00000553218 849 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 ZNF519P2-201ENST00000557032 169 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC092325.1-201ENST00000566449 554 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 AC008752.3-201ENST00000588113 712 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 FAM71BP1-201ENST00000604431 523 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 ELOCP5-201ENST00000604924 333 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 RMST_4.1-201ENST00000616886 107 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 SCARNA4-202ENST00000625402 129 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 MIR1321-201ENST00000637766 79 ntBASIC1.05□□□□□ -2.24
COL11A1P12107 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
COL11A1P12107 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
COL11A1P12107 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
COL11A1P12107 MTND4P14-201ENST00000435799 1354 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 Y_RNA.409-201ENST00000383990 98 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 MIR578-201ENST00000384828 96 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 MIR218-1-201ENST00000384999 110 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 RNU11-3P-201ENST00000391111 133 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 MIR1283-2-201ENST00000408621 87 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.04□□□□□ -2.24
COL11A1P12107 AC016831.2-201ENST00000417179 352 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 SEPT14P3-201ENST00000439401 183 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.04□□□□□ -2.24
COL11A1P12107 PRPS1P1-201ENST00000445305 876 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 AL732372.2-207ENST00000445840 183 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 SEPT14P2-201ENST00000453405 183 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 C1DP4-201ENST00000455429 424 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 TPT1P7-201ENST00000458300 517 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 RNU7-138P-201ENST00000459479 64 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 AP001025.1-201ENST00000486139 332 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 AC091885.1-201ENST00000506658 268 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 SEPT14P4-201ENST00000513445 186 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 Y_RNA.682-201ENST00000516457 100 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 Y_RNA.687-201ENST00000516558 91 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 FO082796.1-201ENST00000523795 183 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 COPS8P3-201ENST00000526024 482 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 AC023050.3-201ENST00000541142 333 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 AC136619.2-201ENST00000563361 631 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 AP001330.5-201ENST00000607176 411 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 DISC2.1-201ENST00000612827 205 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 U4.5-201ENST00000617137 123 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 Z69720.2-201ENST00000624755 279 ntBASIC1.04□□□□□ -2.24
COL11A1P12107 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.04□□□□□ -2.24
COL11A1P12107 SNORD114-19-201ENST00000363072 75 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 RNU6-1210P-201ENST00000363775 107 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 SNORD73A-201ENST00000386062 65 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
COL11A1P12107 RNA5SP390-201ENST00000410191 113 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 FCF1P9-201ENST00000412546 282 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.03□□□□□ -2.24
COL11A1P12107 AL353193.1-201ENST00000421444 268 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 MTCO1P20-201ENST00000425366 358 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 AL669831.1-202ENST00000428504 417 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 UBE2V1P8-201ENST00000437166 265 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 GTF2IP13-201ENST00000438487 386 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 AL163973.1-201ENST00000484753 577 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 HMGB1P35-201ENST00000503360 598 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.03□□□□□ -2.24
COL11A1P12107 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL11A1P12107 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.03□□□□□ -2.24
COL11A1P12107 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.03□□□□□ -2.24
COL11A1P12107 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.03□□□□□ -2.24
COL11A1P12107 AC026371.1-201ENST00000551867 419 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 AL157687.1-201ENST00000554853 619 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 AL512360.1-201ENST00000555346 234 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.03□□□□□ -2.24
COL11A1P12107 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.03□□□□□ -2.24
COL11A1P12107 AC103810.8-201ENST00000607347 118 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 MIR6134-201ENST00000617606 109 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 AC098679.4-201ENST00000624241 654 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 AC068137.4-201ENST00000638485 296 ntBASIC1.03□□□□□ -2.24
COL11A1P12107 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL11A1P12107 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
COL11A1P12107 RNU6-428P-201ENST00000362942 107 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 RNU6-527P-201ENST00000363425 104 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 SNORD113-7-201ENST00000363762 77 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 RNU6-105P-201ENST00000363909 104 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 SNORA69-201ENST00000383895 132 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 Y_RNA.453-201ENST00000384223 109 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 Y_RNA.559-201ENST00000384686 107 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 RNU1-78P-201ENST00000391248 165 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 MTCO3P40-201ENST00000392516 676 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 AL591034.2-201ENST00000402839 359 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 RNU2-41P-201ENST00000410991 178 ntBASIC1.03□□□□□ -2.25
COL11A1P12107 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.03□□□□□ -2.25
COL11A1P12107 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.03□□□□□ -2.25
COL11A1P12107 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.03□□□□□ -2.25
COL11A1P12107 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.03□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms