Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.18□□□□□ -2.38
CXCL1P09341 SNAP23P1-201ENST00000433229 246 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.18□□□□□ -2.38
CXCL1P09341 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.18□□□□□ -2.38
CXCL1P09341 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.18□□□□□ -2.38
CXCL1P09341 HMGB1P29-201ENST00000505659 499 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.18□□□□□ -2.38
CXCL1P09341 RNU6-685P-201ENST00000517088 95 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 AC022616.6-201ENST00000520479 119 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.18□□□□□ -2.38
CXCL1P09341 MTND1P15-201ENST00000579262 949 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 Z99289.3-201ENST00000605586 594 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 AC073349.3-201ENST00000617616 186 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 MIR8054-201ENST00000620877 86 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 AC243829.3-201ENST00000622177 108 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 AC106754.2-201ENST00000623006 233 ntBASIC0.18□□□□□ -2.38
CXCL1P09341 RNU4-48P-201ENST00000365559 182 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 RNU6-975P-201ENST00000384296 105 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 SNORA12.1-201ENST00000390873 148 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 SNORD99-201ENST00000408612 74 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 RNU6-387P-201ENST00000411331 105 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 AC137499.1-201ENST00000427602 88 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 AL603825.1-201ENST00000438481 80 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.17□□□□□ -2.38
CXCL1P09341 MTCO2P29-201ENST00000465212 189 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 AC022493.2-201ENST00000506122 481 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 RBBP4P6-201ENST00000508098 202 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 RNA5SP337-201ENST00000517007 109 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 AC023050.3-201ENST00000541142 333 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.17□□□□□ -2.38
CXCL1P09341 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.17□□□□□ -2.38
CXCL1P09341 AL391840.1-201ENST00000571144 367 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 AL162424.1-201ENST00000602325 221 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 AC022217.4-201ENST00000604389 163 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 AC243829.6-201ENST00000612652 106 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 AL603839.4-201ENST00000624658 1005 ntBASIC0.17□□□□□ -2.38
CXCL1P09341 RNU6-199P-201ENST00000362954 107 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 SNORD114-22-201ENST00000365423 72 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.16□□□□□ -2.38
CXCL1P09341 RNU6-417P-201ENST00000384712 107 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 AL451046.2-201ENST00000403074 277 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 TIMM9P3-201ENST00000428659 274 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 AC008628.2-201ENST00000502605 298 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 RNU6-947P-201ENST00000516264 106 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CXCL1P09341 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.16□□□□□ -2.38
CXCL1P09341 AC104458.1-201ENST00000608243 463 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.16□□□□□ -2.38
CXCL1P09341 AC068787.1-201ENST00000623908 691 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 AL359740.1-201ENST00000624340 592 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 U6.108-201ENST00000637764 58 ntBASIC0.16□□□□□ -2.38
CXCL1P09341 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.38
CXCL1P09341 Y_RNA.324-201ENST00000365165 102 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 RNU6-61P-201ENST00000365528 109 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 SNORD116.1-201ENST00000365628 92 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 VTRNA1-3-201ENST00000365645 89 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 RNU6-1257P-201ENST00000384625 110 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 MIR216A-201ENST00000385063 110 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 RNA5SP323-201ENST00000391094 133 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 RNA5SP467-201ENST00000391274 118 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 MIR208B-201ENST00000401172 77 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 MIR1276-201ENST00000408707 83 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 AL356583.2-201ENST00000426536 280 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 MED13P1-201ENST00000428342 171 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 AC000111.3-201ENST00000433478 193 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.15□□□□□ -2.39
CXCL1P09341 AC245047.8-201ENST00000456455 284 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.15□□□□□ -2.39
CXCL1P09341 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.15□□□□□ -2.39
CXCL1P09341 MIR5000-201ENST00000577717 103 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 MIR151B-201ENST00000584249 96 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 AC146944.4-201ENST00000602697 718 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 PART1_2.1-201ENST00000612397 250 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 MIR6788-201ENST00000618842 66 ntBASIC0.15□□□□□ -2.39
CXCL1P09341 MIRLET7D-201ENST00000362263 87 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-37P-201ENST00000362692 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-11P-201ENST00000364234 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-1327P-201ENST00000365302 105 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 SNORA2.2-201ENST00000365473 135 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-25P-201ENST00000383873 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-1-201ENST00000383898 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-48P-201ENST00000384161 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-36P-201ENST00000384172 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-4P-201ENST00000384205 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-5P-201ENST00000384238 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-3P-201ENST00000384314 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-16P-201ENST00000384385 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-15P-201ENST00000384534 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-2-201ENST00000384627 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-29P-201ENST00000384637 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-9-201ENST00000384776 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-33P-201ENST00000384793 107 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 MIR558-201ENST00000384920 94 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU6-440P-201ENST00000390882 105 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 RNU2-39P-201ENST00000410604 198 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 CDK8P2-201ENST00000415020 547 ntBASIC0.14□□□□□ -2.39
CXCL1P09341 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.14□□□□□ -2.39
CXCL1P09341 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms