Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 SNORD1A-201ENST00000364968 72 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 Y_RNA.367-201ENST00000365544 101 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNU6-517P-201ENST00000384362 110 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNU6-1127P-201ENST00000384580 107 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.86□□□□□ -2.27
COL4A2P08572 AC139712.2-201ENST00000424302 339 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.86□□□□□ -2.27
COL4A2P08572 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.86□□□□□ -2.27
COL4A2P08572 RPS29P15-201ENST00000458329 171 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RNU7-14P-201ENST00000459331 62 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC016632.1-201ENST00000503994 196 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.86□□□□□ -2.27
COL4A2P08572 AC079140.3-201ENST00000511111 550 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 SNORA31.17-201ENST00000516953 127 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 EIF4A1P12-201ENST00000551910 141 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AC103996.1-201ENST00000555468 102 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 MIR1273G-201ENST00000577677 100 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 MIR4703-201ENST00000577728 79 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 7SK.7-201ENST00000603504 247 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AL034555.1-201ENST00000604816 211 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 RPL17P51-201ENST00000605218 238 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 AL603755.1-201ENST00000619504 163 ntBASIC0.86□□□□□ -2.27
COL4A2P08572 MTND5P9-201ENST00000503854 1755 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 Y_RNA.115-201ENST00000363272 98 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 RNU6-23P-201ENST00000363283 107 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 RNU6-716P-201ENST00000365621 103 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
COL4A2P08572 MTCYBP2-201ENST00000407745 171 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A2P08572 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.85□□□□□ -2.27
COL4A2P08572 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A2P08572 AL590135.1-201ENST00000422215 156 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 AC019205.3-201ENST00000424573 156 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 RPL31P35-201ENST00000431058 377 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 AL022238.1-201ENST00000442557 355 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 AC016700.2-201ENST00000446011 156 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A2P08572 ART2BP-201ENST00000453501 499 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.85□□□□□ -2.27
COL4A2P08572 AC005908.1-201ENST00000468701 347 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 MTND3P7-201ENST00000474435 343 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 AC015911.1-201ENST00000495111 156 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A2P08572 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A2P08572 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.85□□□□□ -2.27
COL4A2P08572 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.85□□□□□ -2.27
COL4A2P08572 AC021231.3-201ENST00000558497 370 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 CYP4A27P-201ENST00000567218 190 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 AC090517.1-201ENST00000569307 266 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 AC040904.1-201ENST00000590850 223 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 AC005520.5-201ENST00000613926 164 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 AL159152.1-201ENST00000635019 2587 ntBASIC0.85□□□□□ -2.27
COL4A2P08572 FGF7P2-201ENST00000332473 296 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 RNU6-414P-201ENST00000363705 104 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 U3.9-201ENST00000363823 204 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 RNU6-606P-201ENST00000384721 111 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A2P08572 FTH1P12-201ENST00000432137 551 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 AC002486.1-201ENST00000435098 391 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A2P08572 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A2P08572 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A2P08572 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A2P08572 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A2P08572 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A2P08572 RNU6-1037P-201ENST00000459571 107 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 AC130509.1-201ENST00000464158 433 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 RPS23P4-201ENST00000487908 423 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A2P08572 AK3P2-201ENST00000507976 429 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A2P08572 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.84□□□□□ -2.27
COL4A2P08572 RNU6-970P-201ENST00000516312 107 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 MTND4P7-201ENST00000523876 130 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.84□□□□□ -2.27
COL4A2P08572 MIR5094-201ENST00000578766 85 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 AC012507.3-201ENST00000603556 477 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 AC025449.1-201ENST00000603896 529 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 U2.17-201ENST00000611454 95 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 AC007742.2-201ENST00000618226 398 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 AC022418.1-201ENST00000624118 445 ntBASIC0.84□□□□□ -2.27
COL4A2P08572 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
COL4A2P08572 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.28
COL4A2P08572 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.84□□□□□ -2.28
COL4A2P08572 RNU6-862P-201ENST00000362804 105 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 SNORD32B-201ENST00000364460 84 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 Y_RNA.255-201ENST00000364581 97 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 SNORD32A-201ENST00000364805 84 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 RNU6-336P-201ENST00000364891 107 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 RNU6-297P-201ENST00000384636 107 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
COL4A2P08572 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
COL4A2P08572 SNORA48.1-201ENST00000390879 135 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 SNORA26.8-201ENST00000391306 124 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 RNU6-955P-201ENST00000410497 104 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 MTCO1P21-201ENST00000416634 589 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 MRPL35P3-201ENST00000421557 364 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 RPL23AP95-201ENST00000426806 265 ntBASIC0.84□□□□□ -2.28
COL4A2P08572 SNRPEP8-201ENST00000442866 260 ntBASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms