Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 Y_RNA.530-201ENST00000384587 101 ntBASIC1.75□□□□□ -2.13
SFTPBP07988 MTCO1P21-201ENST00000416634 589 ntBASIC1.75□□□□□ -2.13
SFTPBP07988 Z82205.1-201ENST00000428456 297 ntBASIC1.75□□□□□ -2.13
SFTPBP07988 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.75□□□□□ -2.13
SFTPBP07988 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.75□□□□□ -2.13
SFTPBP07988 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.75□□□□□ -2.13
SFTPBP07988 AF186996.7-201ENST00000492781 209 ntBASIC1.75□□□□□ -2.13
SFTPBP07988 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.75□□□□□ -2.13
SFTPBP07988 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.75□□□□□ -2.13
SFTPBP07988 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.75□□□□□ -2.13
SFTPBP07988 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.75□□□□□ -2.13
SFTPBP07988 MIR3935-201ENST00000583472 104 ntBASIC1.75□□□□□ -2.13
SFTPBP07988 AC016727.2-201ENST00000603988 621 ntBASIC1.75□□□□□ -2.13
SFTPBP07988 AC012493.3-201ENST00000604494 112 ntBASIC1.75□□□□□ -2.13
SFTPBP07988 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
SFTPBP07988 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.74□□□□□ -2.13
SFTPBP07988 SNORD31B-201ENST00000364977 69 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 Y_RNA.450-201ENST00000384198 113 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 RNU6-790P-201ENST00000384479 105 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 RNU6-95P-201ENST00000384697 107 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SFTPBP07988 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SFTPBP07988 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SFTPBP07988 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SFTPBP07988 SNORA48.1-201ENST00000390879 135 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 RNA5SP212-201ENST00000391223 107 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 AL079342.1-201ENST00000401460 267 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.74□□□□□ -2.13
SFTPBP07988 SNRPEP10-201ENST00000420249 274 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.74□□□□□ -2.13
SFTPBP07988 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SFTPBP07988 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.74□□□□□ -2.13
SFTPBP07988 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.74□□□□□ -2.13
SFTPBP07988 FAM206BP-201ENST00000510179 541 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 RNU6-256P-201ENST00000516747 97 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 FGF7P1-201ENST00000582820 288 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.74□□□□□ -2.13
SFTPBP07988 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SFTPBP07988 AL138726.1-201ENST00000614873 333 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 U1.36-201ENST00000620684 176 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 AC090617.10-201ENST00000624308 134 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 AC022513.1-201ENST00000624512 117 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 MIR219B-201ENST00000637023 88 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
SFTPBP07988 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
SFTPBP07988 AC233981.2-201ENST00000611524 1614 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 AC092881.1-201ENST00000638218 2733 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 RNU6-545P-201ENST00000362681 104 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 Y_RNA.89-201ENST00000363031 102 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 RNU6-1215P-201ENST00000384441 102 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SFTPBP07988 AL139156.1-201ENST00000412785 841 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 MTND1P11-201ENST00000456661 876 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 AC016925.1-201ENST00000458303 298 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 RNU1-131P-201ENST00000458943 161 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 AC091435.1-201ENST00000505442 584 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 RNA5SP458-201ENST00000516188 119 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 RNU2-44P-201ENST00000516795 194 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.73□□□□□ -2.13
SFTPBP07988 MIR3672-201ENST00000584290 82 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 AC023043.2-201ENST00000589678 1026 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.73□□□□□ -2.13
SFTPBP07988 AC005296.1-201ENST00000616145 209 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 DUXAP9-208ENST00000622815 614 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 AC091932.3-201ENST00000624223 323 ntBASIC1.73□□□□□ -2.13
SFTPBP07988 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SFTPBP07988 Y_RNA.414-201ENST00000384011 101 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 RNU6-784P-201ENST00000384330 106 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 AL356432.1-201ENST00000405809 419 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 EIF4EP2-201ENST00000422816 654 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.72□□□□□ -2.13
SFTPBP07988 AL645568.3-201ENST00000433683 316 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.72□□□□□ -2.13
SFTPBP07988 AC010531.2-201ENST00000465012 153 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.72□□□□□ -2.13
SFTPBP07988 RN7SL274P-201ENST00000492268 272 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 TRBVA-201ENST00000498804 316 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 MTCYBP18-201ENST00000501056 747 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.72□□□□□ -2.13
SFTPBP07988 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 SNORA59B-202ENST00000578183 701 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 AC005562.2-201ENST00000618264 111 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.72□□□□□ -2.13
SFTPBP07988 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.72□□□□□ -2.13
SFTPBP07988 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.72□□□□□ -2.13
SFTPBP07988 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.72□□□□□ -2.13
SFTPBP07988 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SFTPBP07988 CBX3P1-201ENST00000325243 554 ntBASIC1.71□□□□□ -2.14
SFTPBP07988 RNU6-562P-201ENST00000362731 107 ntBASIC1.71□□□□□ -2.14
SFTPBP07988 RNU6-534P-201ENST00000364877 106 ntBASIC1.71□□□□□ -2.14
SFTPBP07988 Y_RNA.295-201ENST00000364918 102 ntBASIC1.71□□□□□ -2.14
SFTPBP07988 RNU6-877P-201ENST00000383868 107 ntBASIC1.71□□□□□ -2.14
SFTPBP07988 MIR487A-201ENST00000385009 80 ntBASIC1.71□□□□□ -2.14
SFTPBP07988 SNORD115-47-201ENST00000391226 86 ntBASIC1.71□□□□□ -2.14
SFTPBP07988 RPS26P42-201ENST00000413485 326 ntBASIC1.71□□□□□ -2.14
SFTPBP07988 AL513185.2-201ENST00000425543 193 ntBASIC1.71□□□□□ -2.14
SFTPBP07988 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.71□□□□□ -2.14
SFTPBP07988 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms